Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01674 ATGGCAGGTAGCCTTCAAGTCAGTGGCTCCACACGTTTGCATGCCAAAAGGGTGTCTTCAGTCACACGTGCAGGCTTCACAGTTAGAGCACAACATCAACAAGAACAAGTGAGTGGTGATGCTCACAGCAGCCGTAGGACAGTGCTTTCTCTTGTTGCTGCTGGTTTGGCCACTGGCTCCTTTGTTCAAGCTGTTCTTGCTGATGCCAAATCCATCAAAGTTGGACCACCTCCTCCACCTTCTGATAGGTTCTTCCTTCAAGCACTGTCTCCTAGCGAGGCTGCACAAAGGGCAAAGGAATCAGCCAAAGAAATTGTTGCTGTTAAGTCTTTAATAGAAAAGAAGGCTTGGCCATATGTTCAGAATGATCTGCGTCTCAGGGCTGAGTATCTGCGGTTTGATCTCAACACTGTCATTGCTGCAAAGTCTAAGGATGAGAAGAAATCACTCAAGGAACTCACAGGCAAGCTCTACGAGAATATCAGCAATCTGGATCATGCAGCAAAAATTAAGAGCAGCCCAGAAGCAGAGAAGTACTATGCTGCTACTATTTCTACTCTGAATGATGTTCTTGCCAAGCTTGGTTAA 588 0.4626 MAGSLQVSGSTRLHAKRVSSVTRAGFTVRAQHQQEQVSGDAHSSRRTVLSLVAAGLATGSFVQAVLADAKSIKVGPPPPPSDRFFLQALSPSEAAQRAKESAKEIVAVKSLIEKKAWPYVQNDLRLRAEYLRFDLNTVIAAKSKDEKKSLKELTGKLYENISNLDHAAKIKSSPEAEKYYAATISTLNDVLAKLG 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01674 195 PANTHER OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC 29 195 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Vimu9g01674 195 Gene3D - 68 195 IPR023222 -
Vimu9g01674 195 SUPERFAMILY Oxygen-evolving enhancer protein 3, 84 194 IPR023222 -
Vimu9g01674 195 Pfam Oxygen evolving enhancer protein 3 (PsbQ) 19 82 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Vimu9g01674 195 Pfam Oxygen evolving enhancer protein 3 (PsbQ) 82 195 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01674 Vimu-Chr9 25940642 25942323 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01674 K08901 - gmx:100306034 300.056