Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01654 AAGAAGAAGAGGAAGAAGATGATGCAGAGGTTCTTCACAAAGGCAAAGCTTAGCCTTAATACATACCGAAGCTTCTCTTCTTCTCAACACGTCATTCTCGACAACCCCAATCACAGTCAGGTTTTGGTCGAAGGAAATGGATGCTCCAGAATGGCCATTCTCAATAGACCCTCTGCTCTCAATGCTCTCAACACCAACATGGTATCTTTCCTTTTCTTCTCATTGCTTCAGCTGGCCACGCTGCATAAATTTTATAGGAGCTGGGAAGATAACCCTGATATTGGATTTGTGATGATGAAGGGCAGTGGCCGAGCATTTGCAGCTGGTGGAGATATTGTTGCGCTTTACCATTTGATAAACAAAGGAAACATGGAAGCGTGTAAAGAATTTTTCAGAACAGCCTATAGTTTTATGTACCTGATAGGTACATATTTGAAGCCACATGTGGCACTTCTAAATGGCATTACCATGGGTGGTGGGGCTGGGGTTTCAATCCCTGGGACATTCCGTGTTGCAACAGACAAAACTATTTTTGCTACCCCTGAAGTTCATATTGGATTCCACCCGGATGCTGCAGCATCTTTTTACCTTTCACATTTACCTGGTCATTTAGGAGAGTACTTGGCTCTGACAGGGGAAAAGCTCAACGGAGTAGAGATGGTTACCTGCGGGCTTGCTACACACTATTCATTAAGTGCAAGGCTTCCTTTAATTGAAGAACAGCTGGGGAAATTAGTTACTGATGACCCATCTGTCATTGAAGCCACTTTAGAACATTATGGTGACCTTGTGCATCCAGACAGCAGTAGCGTACTACAAAGGATTGAAATTCTAGATAAATGCTTTTGCCATGATTCAGTTGAAGAGATTGTTGATGCTATGGAAAATGCCGCAAGTGAAACAAAAGATGCTTGGTGTATTTCTACCCTAAATAGACTCAAAGAAGCCTCTCCATTGAGCTTGAAGGTTGCCTTGAGATCTATAAGAGAAGGTACATTTCAGACTCTTGATCAATGTTTGCTGCGTGAGTACCGAATGACTTTACAAGCAATACATGGGAAAATATCTGGAGATTTCTGTGAGGGAGTAAGGGCACGCGTGGTGGACAAGGACTTTGCACCAAAGTGGGATCCTCCAACCTTAGAAAAGGTGTCTCAAGACATGGTGGATCAGTACTTCTTACCTTTGAGTGATTCTGAACCTGATCTAGAGCTGCCCACAAAAAGTCGTGAAGCATTTCTATAG 1245 0.4305 KKKRKKMMQRFFTKAKLSLNTYRSFSSSQHVILDNPNHSQVLVEGNGCSRMAILNRPSALNALNTNMVSFLFFSLLQLATLHKFYRSWEDNPDIGFVMMKGSGRAFAAGGDIVALYHLINKGNMEACKEFFRTAYSFMYLIGTYLKPHVALLNGITMGGGAGVSIPGTFRVATDKTIFATPEVHIGFHPDAAASFYLSHLPGHLGEYLALTGEKLNGVEMVTCGLATHYSLSARLPLIEEQLGKLVTDDPSVIEATLEHYGDLVHPDSSSVLQRIEILDKCFCHDSVEEIVDAMENAASETKDAWCISTLNRLKEASPLSLKVALRSIREGTFQTLDQCLLREYRMTLQAIHGKISGDFCEGVRARVVDKDFAPKWDPPTLEKVSQDMVDQYFLPLSDSEPDLELPTKSREAFL 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01654 414 SUPERFAMILY ClpP/crotonase 39 379 IPR029045 -
Vimu9g01654 414 Gene3D - 35 409 - -
Vimu9g01654 414 FunFam Probable 3-hydroxyisobutyryl-CoA hydrolase 2 35 409 - -
Vimu9g01654 414 Pfam Enoyl-CoA hydratase/isomerase 50 393 IPR045004 -
Vimu9g01654 414 CDD crotonase-like 41 228 - -
Vimu9g01654 414 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 37 409 IPR032259 GO:0003860
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01654 Vimu-Chr9 25753095 25760877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01654 36 414 Acyl Lipid Metabolism Gene Families AT4G31810 61.795 0.0 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01654 K05605 - gmx:100801676 712.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g01654 9 25753095 25760877 Vimu9g01654 9 25753095 25760877 ECH