Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01612 ATGAAGCAATCGAAGGATCCGTTCGAAGCAGCGTTCGAGGAATCGCCGCCAGAATCTCCGACGGAGATAGAGGCGGACGCAATCCATAACCATAGCCATAACCATAATCATAACCAAAACCCTATTCCTTCTCCTTCTGTTCTACCCCTCAACCCAGGGCCTCCGCAGAAGGCGAGTGCGGCGGTCAAGAACAAAGACAAAGACAAGGACGATGAAGAGGAGGAAGAAGAAGACAACATGGACGTTGAGCTTTCCAAGCTCCCTTCCACCGGCGACCCTCACAAAATGGCCAAGATGCAGACAATTTTATCTCAGTTCAGCGAAGAGCAGATGAGTAGATACGAGTCCTTCCGGAGGGCTGGGTTTCAGAGAGCTAACATGAAAAGGTTATTGGCTAGTATCACGGGGACCCAGAAGATTTCAGTGCCAATGACGATTGTAGTATCAGGCATTGCAAAAATGTTTGTTGGTGAAGTTGTTGAAACAGCTAGAATAGTTATGAAAGAAAGGAAGGAATCTGGACCAATTCGGCCTTGTCATCTGAGAGAAGCATATAGACGGCTAAAACTTGAAGGAAAAGTCTTTAAGAGATCAGCCTCAAGGCTCTTCCGGTAG 615 0.4732 MKQSKDPFEAAFEESPPESPTEIEADAIHNHSHNHNHNQNPIPSPSVLPLNPGPPQKASAAVKNKDKDKDDEEEEEEDNMDVELSKLPSTGDPHKMAKMQTILSQFSEEQMSRYESFRRAGFQRANMKRLLASITGTQKISVPMTIVVSGIAKMFVGEVVETARIVMKERKESGPIRPCHLREAYRRLKLEGKVFKRSASRLFR 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01612 204 CDD TAF11 106 189 IPR006809 GO:0005634|GO:0006367
Vimu9g01612 204 Pfam hTAFII28-like protein conserved region 102 187 IPR006809 GO:0005634|GO:0006367
Vimu9g01612 204 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 11-RELATED 55 204 IPR045127 GO:0005669|GO:0006367|GO:0051123
Vimu9g01612 204 SUPERFAMILY Histone-fold 106 194 IPR009072 GO:0046982
Vimu9g01612 204 FunFam Transcription initiation factor TFIID subunit 11 106 195 - -
Vimu9g01612 204 Gene3D Histone, subunit A 106 195 IPR009072 GO:0046982
Vimu9g01612 204 MobiDBLite consensus disorder prediction 1 94 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01612 K03135 - gmx:100305481 252.677