Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01596 ATGGGTAGATTGAGAATTGTTTTCTCTCACAGAAAATTGCAAAAGACAGAAGGACAAAGGAGAAGTCTGCGATTATCTACATTGGTGACCAAGGCTAATGATCATTTAGATAATAAGCAAGGACCTACATTTCGAACAAGGGGCAAGAAGAACACAAAATTGAGGACACCCCCAACAACTCAAACCATCAAACAACCAAACATTCTAGCCATAATGATATTCAAAAGAAAAGTTGTAATGGTGAGTAAAATTGTATGTCATTTTATGGTTGTTCATAATGCATTCGATTTACACATGGTTGATAATGAATCAGATAAGTCATCAAAGTTTTCATCTTCGATCTTTCTGCCAGAGAAACAAATACTTCAACTTCTACTTGACACTTTACAAAGGAAAGACACCTATGAAATATTTGTAGAACCAGTTGATCCAAATGAGGTTAATGATTATTATGCAACCATTGAAGAGCCTATGGATTTTGGCACTATTAGGGCTAAACTACATAAGAAGATGTACAAAACTTTAGAACAATTTGAGGTTAACAACCTTTTATTATGTATATACAGATATCATGATGTTTTCAAATATTTAACAATGCAATGCGTTTTAATTCTCCTGGTACCATATATTTTAGGCAGTTTTAAGACAAATTGTCTTGATGCTAAAGATGCTAAGATTACCATAGGTATTAAAGAGTATAACAAAAGTGAGTCTTTTGAGATTGATAGACGTGGTATGTATAAACCCTTCTACATTGACAAGGATAAGTCTATACTTCCAACAATAAATGGTGAACTAAGACTTCTTCAGCATGTTGGTCAACAAGATATTGGCTATAAAGATAGCTTGATGTTGTTTGCCAAAGATTTAGGACCCATTGCCCAAAATATAGCCAAAATGAAATTTCTTGGATGTGAAATTCTCAAAGCATCTGCTTCTGCTCCATGTAAAACAGAAAAGGATACTTTCAACATAGTTACTACTTCTTCCATGATATCTTATCATTTGGATAATGTTTCTAGTTATCCTAACACAATAAGTCTCACAGATAATGTTGAAAAACAGAAAGGTTGCAATCCTTTAAAAGGCTACACTTGGAGACATTATAAGTGGTGTGATAAGGAGTGCTTAAGTAAGAGATTTAGTTTTGAGCCATGTTATTCATGGGATTGCTTGAACTAA 1182 0.3342 MGRLRIVFSHRKLQKTEGQRRSLRLSTLVTKANDHLDNKQGPTFRTRGKKNTKLRTPPTTQTIKQPNILAIMIFKRKVVMVSKIVCHFMVVHNAFDLHMVDNESDKSSKFSSSIFLPEKQILQLLLDTLQRKDTYEIFVEPVDPNEVNDYYATIEEPMDFGTIRAKLHKKMYKTLEQFEVNNLLLCIYRYHDVFKYLTMQCVLILLVPYILGSFKTNCLDAKDAKITIGIKEYNKSESFEIDRRGMYKPFYIDKDKSILPTINGELRLLQHVGQQDIGYKDSLMLFAKDLGPIAQNIAKMKFLGCEILKASASAPCKTEKDTFNIVTTSSMISYHLDNVSSYPNTISLTDNVEKQKGCNPLKGYTWRHYKWCDKECLSKRFSFEPCYSWDCLN 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01596 393 SUPERFAMILY Bromodomain 108 180 IPR036427 GO:0005515
Vimu9g01596 393 Coils Coil 392 393 - -
Vimu9g01596 393 Gene3D - 96 188 IPR036427 GO:0005515
Vimu9g01596 393 SMART bromo_6 111 206 IPR001487 GO:0005515
Vimu9g01596 393 MobiDBLite consensus disorder prediction 36 60 - -
Vimu9g01596 393 Pfam Bromodomain 125 186 IPR001487 GO:0005515
Vimu9g01596 393 PRINTS Bromodomain signature 163 181 IPR001487 GO:0005515
Vimu9g01596 393 PRINTS Bromodomain signature 133 146 IPR001487 GO:0005515
Vimu9g01596 393 PRINTS Bromodomain signature 147 163 IPR001487 GO:0005515
Vimu9g01596 393 PANTHER BROMODOMAIN CONTAINING PROTEIN 234 299 - -
Vimu9g01596 393 ProSiteProfiles Bromodomain profile. 130 185 IPR001487 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01596 Vimu-Chr9 25286065 25288177 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01596 K22184 - vun:114166888 163.31