Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01592 ATGAAAAAATATGTTGGTAAGAAAAGAAGAGTATTTGAGTTGAGCATTGGTAATATTGTTTTGGTAGAATTGCAACCCTATAGGGAGCATTCGGTTGCTTTCAAGAAGAACCAGAAACTCAGTTTAAGGTACTTTGATCCTTTTTCAGTAATTGAGCGAATTGAACAAGTTGCTTACAAACAACTTTTGCCCCCAAGGAACCCGAAATCATCTGGTCTTTCACCTTCTGAGTTAAAGCTTTGTAAGGGAGATCATTTGCAACCTTATGTTCCCTTACCTATTATTCACCATGAGTTGCATCCTGTCATTCAACATGTTTCTATTTTGCAATCTCGGGTGATATTGAGAGGCCAGCATCAGATTACACAACATCTAATTCAGTGGGAAGGCGTAGATGCATTTGTTGCCATATGGAAAGATCACGATATTTTGCAGCAAGCTTTACATTTTAATGGGGGAGGAACTGTGATGAAGAAACAAAAGAGAAAAGAAGCTGTGAAGAAATATCTTGGAGCCGTCCTTGCGTTGGTAGCAATGAGGAAGGTACACCCTGGTGCATGTGTGAGTGAGACAGCGTGGGAGAAGTCAAATAGTGGTGTTGGTGGTGGTGATGATGCAGTGGTTCTTACAGTGTGGAAGAAGTCTCTCCTTCCAAATTGCCATGGATTCACCGTTTTCGACACTAACAGAGGGAATCTGGTGTTCAGGGTGGATAACTACATTGGAGGGAACAAGGATCACATACTTCTCATGGACGCTGCAGGCACACCTCTCCTCACTATCCGCCGCAAGAGGCTGAGCTTGGGAGACACCTGGCTGGTGTTTGAAGGAGAGGACGAGTCTCTGAAGCCACTTTTTACAGTGAGGAAGAGTGTCAGCATCTTGAACAACAGCAACAAGTGTTTGACACACCTCCTGAGCTCCTTTGGAACAGGAAATACGAAGAAGGAAGTTGCGTATGAGATAGAGGGGTGCTACGCCCGGCGTTGCTGCACGTTTTACAGCAAGAACAGGAGAAAAGTTGCAGAGATAAAGATGAAAGAAGGTGAGGCAGGAGGGGTAGCTTTTGGCGCAGACATCTTCCGTCTCATTGTACAGCCTGAGATGGACACCGCTCTCGCCATGGCCTTTCTCATCATCCTTGATTACGTGTTTGGATCCCGTTGA 1167 0.4482 MKKYVGKKRRVFELSIGNIVLVELQPYREHSVAFKKNQKLSLRYFDPFSVIERIEQVAYKQLLPPRNPKSSGLSPSELKLCKGDHLQPYVPLPIIHHELHPVIQHVSILQSRVILRGQHQITQHLIQWEGVDAFVAIWKDHDILQQALHFNGGGTVMKKQKRKEAVKKYLGAVLALVAMRKVHPGACVSETAWEKSNSGVGGGDDAVVLTVWKKSLLPNCHGFTVFDTNRGNLVFRVDNYIGGNKDHILLMDAAGTPLLTIRRKRLSLGDTWLVFEGEDESLKPLFTVRKSVSILNNSNKCLTHLLSSFGTGNTKKEVAYEIEGCYARRCCTFYSKNRRKVAEIKMKEGEAGGVAFGADIFRLIVQPEMDTALAMAFLIILDYVFGSR 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01592 388 SUPERFAMILY Tubby C-terminal domain-like 205 385 IPR025659 -
Vimu9g01592 388 Gene3D - 203 388 IPR038595 -
Vimu9g01592 388 PANTHER - 208 384 IPR007612 -
Vimu9g01592 388 Pfam LURP-one-related 206 380 IPR007612 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01592 Vimu-Chr9 25264000 25265848 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01592 - - aprc:113850590 265.388