Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01589 ATGCGGTGGCCGACCGTGGTTTCGGTAGCGTCTACTATCGCTGGCGACGCGTTAAACTGGAAGCAGGTGCCGGCGCGGTGGCTGGTTCAAAGATGGGGCGATGGCATGCGTGAGCTCGAGGATGGCGACCCCAACCTAAGCGGAATCCTTTGCTGTGAAGGGGCTCATACCAGAAAATCACAACAGCTCCCAACAGTTGGTCTAAGTGACTCTGATGACAACGTCATAAGTATGATGGGCATGGTGGCTGTTACATGGACAAGTTATCTAAGAAAGCGTCTTCCACTAACAATAAGGTCTCTTCATACCTTGAAAGGTAATGAATTAGACCAAATTTTAATGTCTCCACCTCTTGCATCTTTGGACCTTCCTGACATCTGGAGTTCTAATTCGGCATCTCGGATTATTCCAGCAATACATAAAAGCTTTTCTGCTGGTGTAGTTTCTACTAGTTCTGCAAGTATAGTTTCTACTTCTCCAACATTGGGGGCAATTGATAACCTTAGGTTTTTATTGAATAATGAGAAGAACACTTTCTCCAAGTACCTGAAATTTGGGTGGCCTAGACAGCAGTGTGACAACATTACAGAATTTTCAAGACTTGAAGGTACTGTTGCACAAGAGCTGGCTTCAAGAATGGATCAGGGTTTACCTTCACATCCTGATGGTTATAGGCTGTTTTGCTCTCCTTGTTATGGACAAGTTTTGTCTTTGAAGTTTTTGGTCAGTGATGGGAGCCTTGACTCTTCAATTGAGCTGACTACTGTAGTGCTTGATGGAAAGTTAATATCCATGGAAATCAGATCGAGAATAGCTGCTAAGGTAAGAGAAATGAAGCAATGCCTGAGAAAAGTTCCCGGGTTAGCCGTAATTTTAGTAGGCCAAAGAAGGGATTCTCAAACTTATGTTCGCAACAAGATAATGGCTTGTGAAGAAGTTGGAATCAAGTCTTTGGTGACTGAATTACCCACTGATTGTGCAGAAATGGATGTTCAAAATGCGATCATGAGATTTAACAAAGATCCATCCATTCATGGATTTGTTCCTTCCTTGAGCACTATTCGGTGCTCCAAATTACGACGTGGAGGTAACCCTTCTCTTTCCTGGAACACGCGGCCATGGCATCTAGATGAGGAAAAGGTTCTGGATGCTTTATGTCTTGAGAAAGACGTCGATGGTTTTCATCCCGTTAATATGGGGAATCTTGCCATAAATGGAAGGGAGCCACTGTTTACTCCTTGTACTCCAAAGGGCTGCATTGAGTTATTGATCAGATCAGGAGTCGATATAATGGGGAAGAAAGCCGTAGTGATCGGAAGAAGTAATATTGTTGGTTTGCCAACGTCCTTGTTATTGCAGAGACACCATGCAACAGTCACTGTTATACATCCCTTCACAGAAAACCCTGAACAGATCACCTCAAAAGCTGATATTATAGTTTCAGCTGCTGGAGTGCCTAATTTGGTCCGTGGTAACTGGATTAAGCCTGGTGCAACTGTGATCGATGTTGGTACTACTCCTGTTGAGGATTCTGGCTGTGACGATGGTTATCGTCTCGTAGGCGACGTATGCCATGAAGAAGCCATAAAAGTGGCATCTGCTATTACTCCTGTGCCTGGCGGGGTTGGGCCTATGACAGTTGCAATGCTACTATGTAACACTCTAGTTTCTGCGAAGCGCATGCTGAATTTTAATTGA 1698 0.4417 MRWPTVVSVASTIAGDALNWKQVPARWLVQRWGDGMRELEDGDPNLSGILCCEGAHTRKSQQLPTVGLSDSDDNVISMMGMVAVTWTSYLRKRLPLTIRSLHTLKGNELDQILMSPPLASLDLPDIWSSNSASRIIPAIHKSFSAGVVSTSSASIVSTSPTLGAIDNLRFLLNNEKNTFSKYLKFGWPRQQCDNITEFSRLEGTVAQELASRMDQGLPSHPDGYRLFCSPCYGQVLSLKFLVSDGSLDSSIELTTVVLDGKLISMEIRSRIAAKVREMKQCLRKVPGLAVILVGQRRDSQTYVRNKIMACEEVGIKSLVTELPTDCAEMDVQNAIMRFNKDPSIHGFVPSLSTIRCSKLRRGGNPSLSWNTRPWHLDEEKVLDALCLEKDVDGFHPVNMGNLAINGREPLFTPCTPKGCIELLIRSGVDIMGKKAVVIGRSNIVGLPTSLLLQRHHATVTVIHPFTENPEQITSKADIIVSAAGVPNLVRGNWIKPGATVIDVGTTPVEDSGCDDGYRLVGDVCHEEAIKVASAITPVPGGVGPMTVAMLLCNTLVSAKRMLNFN 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01589 565 CDD NAD_bind_m-THF_DH_Cyclohyd 388 559 IPR020631 GO:0004488
Vimu9g01589 565 Gene3D - 258 538 - -
Vimu9g01589 565 Pfam Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 258 392 IPR020630 GO:0004488
Vimu9g01589 565 FunFam Bifunctional protein FolD 411 538 - -
Vimu9g01589 565 ProSitePatterns Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 539 547 IPR020867 GO:0003824
Vimu9g01589 565 PANTHER C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC-RELATED 255 559 - -
Vimu9g01589 565 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 394 559 IPR036291 -
Vimu9g01589 565 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 286 308 IPR000672 GO:0004488
Vimu9g01589 565 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 535 553 IPR000672 GO:0004488
Vimu9g01589 565 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 518 534 IPR000672 GO:0004488
Vimu9g01589 565 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 327 354 IPR000672 GO:0004488
Vimu9g01589 565 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 477 506 IPR000672 GO:0004488
Vimu9g01589 565 Pfam Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 395 560 IPR020631 GO:0004488
Vimu9g01589 565 Hamap Bifunctional protein FolD [folD]. 255 562 IPR000672 GO:0004488
Vimu9g01589 565 Gene3D Leucine Dehydrogenase, chain A, domain 1 260 555 - -
Vimu9g01589 565 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 254 393 IPR046346 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01589 Vimu-Chr9 25233766 25251037 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01589 - - gmx:100791604 511.916