Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01580 ATGGCGGAAGTGAGAAACAAGCGAGTGGTTCTAAGAAACTATGTGGTTGGTTTTCCGAAGGAATCAGACATGAAAATTGTGGAAGGAAGGGTCAAATTGAAGGTTGCAGAAGGTTTTGATAAGGTGCTTGTGAAGAATCTCTACCTCTCTTGCGACCCTATCATGAGAGTCCTGATGATCAAGATGGATTTCATTGATGAGTATCATCACTACACACCTGATGCTGTCTGTTCGAAATTCATCCGATCGGTTCTCCTCTATCGTCCGACCGTTTTCAACTTACCCTTCACCCGTTTGGTTTTCCTCAGTCCCACCGAGCGTGCCAGCTCCATTAGTAGTATGCTCCACCTCCACGAGAATCTTCTTCTCACTTCCAGAGTTTTCAGGCCATTGACAGGATATGGAGTGTCTAAAGTGTTGGACTCTGGACATCCAGATTATAAAAAAGGTGATTTGGTTTGGGGAATTACCAAATGGGAAGAGTATAGCTTTATCTCCCCATCTCAAATATGTTTCAAAATTGAGCACACTGATGTTCCACTTTCCTACTACACTGGAATTCTTGGTATGCCTGGAATGACTGCTTATGCTGGTTTCTTTGAAATAGGTTCTCCAAAAAAAGGAGAAAATGTTTTTGTTTCAGCTGCCTCTGGTGCTGTTGGTCAACTTGTTGGCCAATTTGCCAAGTTGAGCGGTTGTTATGTTGTTGGAAGTGCTGGAAGCAAAGAGAAGGTTGATCTGCTGAAGAATAAGTTAGGATTTGATGAAGCTTTTAACTACAAGGAAGAGCCAGACCTCGATGCAGCTTTGAAAAGGTACTTTGGAGAAGGCATTGACATATACTTTGAGAATGTTGGGGGGAAGACACTTGATGCAGTACTCCCAAATATGAGACTCCATAGTCGAATACCTGGTCTTGAGAATGGCCCTGCAGCCTTGGTTGGCCTCTTTAGTGGTCGCAATGTCGGAAAACAAGTGGTGGTTGTGGCTCGTGAGTAA 999 0.4364 MAEVRNKRVVLRNYVVGFPKESDMKIVEGRVKLKVAEGFDKVLVKNLYLSCDPIMRVLMIKMDFIDEYHHYTPDAVCSKFIRSVLLYRPTVFNLPFTRLVFLSPTERASSISSMLHLHENLLLTSRVFRPLTGYGVSKVLDSGHPDYKKGDLVWGITKWEEYSFISPSQICFKIEHTDVPLSYYTGILGMPGMTAYAGFFEIGSPKKGENVFVSAASGAVGQLVGQFAKLSGCYVVGSAGSKEKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFGEGIDIYFENVGGKTLDAVLPNMRLHSRIPGLENGPAALVGLFSGRNVGKQVVVVARE 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01580 332 PANTHER PROSTAGLANDIN REDUCTASE 4 304 IPR045010 GO:0016628
Vimu9g01580 332 Pfam Zinc-binding dehydrogenase 219 297 IPR013149 -
Vimu9g01580 332 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 186 304 IPR036291 -
Vimu9g01580 332 Gene3D - 1 86 - -
Vimu9g01580 332 FunFam Prostaglandin reductase 2 187 328 - -
Vimu9g01580 332 SUPERFAMILY GroES-like 130 203 IPR011032 -
Vimu9g01580 332 Pfam N-terminal domain of oxidoreductase 7 62 IPR041694 -
Vimu9g01580 332 SUPERFAMILY GroES-like 4 74 IPR011032 -
Vimu9g01580 332 Gene3D - 187 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01580 Vimu-Chr9 25112576 25121703 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01580 K19825 - gmx:100812880 368.622