Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01578 ATGGCAGAAGTGAAGAACAAGCAAGTGATTCTGAAGAACTATGTGGTTTGTTTTCCAAAAGAATCAGACATGAACATTGTTGAAGGAACCATAACATTGAAGCTTCCAGAAGGTTCCTCTGATGTGCTCCTCAAAAATCTCTACCTCTCATGTGATCCGTACCTGCGACTCCTCATGGCCAAGAACAGATATGTCGGATTTGGCACCTACACGCTTCACTCTCCATTGGCAGGAAATGGTGTGTCTCAAGTGGTGGAATCTGGGAATCCAGATTATAAGAAAGGTGATTTAGTTTGGGGGCCTACTAAATGGGAAGAGTATAGTTTGATACCTTCATCTCAGATACGTTTCAAAATTGAGCACACTGATGTCCCACTCTCCTACTATACTGGAATTCTTGGTATGCCAGGATTGACTGCTTATGGTGGTTTCTTTGAATTCGGGTCTCCCAAAAGAGGAGAAAATGTTTTTGTTTCAGCTGCCTCTGGTGCTGTTGGTCAGCTTGTTGGCCAATTTGCCAAGTTGAGTGGTTGCTATGTTGTTGGAAGTGCTGGAAGCAAAGAGAAGGTGGATCTGTTGAAGAATAAATTAGGATTTGATGAAGCTTTTAACTACAAAGAAGAGTCTGACCTCAATGCAACTTTGAAAAGATACTTTCCAGAAGGCATTGATATTTACTTTGAGAATGTTGGGGGGAAGACACTTGATGCAGTACTCCCAAATATGAGACTCCATGGTCGAATACCTGTTTGTGGAATGATCTCACAGTACAATCTTGCTGAACCAGAAGGTGTAACAAATTTGGCACATCTCATATTTAAGAGGATTAAAATGGAAGGGTTTATTGTAAATGATTTCTACCATTTATATCCCAAATTCTTAGAATTTGTCCTACCTCATATTAGAGAAGGGAAGGTTGTGTATGTGGAAGACATTGCTGAGGGTCTTGAGAATGGCCCTGCAGCCTTGGTTGGCCTCTTCAGTGGTCGCAATGTCGGAAAACAAGTGATTAGTGTTGTTCGTGAGTAA 1029 0.414 MAEVKNKQVILKNYVVCFPKESDMNIVEGTITLKLPEGSSDVLLKNLYLSCDPYLRLLMAKNRYVGFGTYTLHSPLAGNGVSQVVESGNPDYKKGDLVWGPTKWEEYSLIPSSQIRFKIEHTDVPLSYYTGILGMPGLTAYGGFFEFGSPKRGENVFVSAASGAVGQLVGQFAKLSGCYVVGSAGSKEKVDLLKNKLGFDEAFNYKEESDLNATLKRYFPEGIDIYFENVGGKTLDAVLPNMRLHGRIPVCGMISQYNLAEPEGVTNLAHLIFKRIKMEGFIVNDFYHLYPKFLEFVLPHIREGKVVYVEDIAEGLENGPAALVGLFSGRNVGKQVISVVRE 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01578 342 FunFam Prostaglandin reductase 2 132 308 - -
Vimu9g01578 342 SUPERFAMILY GroES-like 285 337 IPR011032 -
Vimu9g01578 342 Gene3D - 132 308 - -
Vimu9g01578 342 PANTHER PROSTAGLANDIN REDUCTASE 4 339 IPR045010 GO:0016628
Vimu9g01578 342 Pfam N-terminal domain of oxidoreductase 7 114 IPR041694 -
Vimu9g01578 342 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 131 302 IPR036291 -
Vimu9g01578 342 SMART PKS_ER_names_mod 42 337 IPR020843 GO:0016491
Vimu9g01578 342 CDD double_bond_reductase_like 4 339 - -
Vimu9g01578 342 Gene3D - 8 337 - -
Vimu9g01578 342 Pfam Zinc-binding dehydrogenase 164 297 IPR013149 -
Vimu9g01578 342 SUPERFAMILY GroES-like 4 169 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01578 Vimu-Chr9 25009691 25011743 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01578 K19825 - gmx:100812880 595.89