Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01572 ATGTTTAATAGTTATGCATTTTACACAGGTAAGGAGTGGAGGAAAAGGCAAATAAGAAAGATAACAGATCGAGTTTTTGAAAAAGTACAGAATCAAAAGGAAAGTGATAAGTTGAGTTTTGAAGATCTGTATATTGCTGTCTTACTCGTGTACAATGATATCAACAAGTATATACCTGGTCCCCATTTTGACCCTCCATCAAAAGCCAGAGTCAAAGAAGTCAAAGAGAAATGTGATATCAACCTTGATGGGGATATTGACCGTGAAGAATTTTTCGATTTCATCCTGCAAATGACAGCTGATACATTCACTGTTGTTAGCCAGAAACTTATTGTCACTATGGTTGTAGCACCAACAGTTGCAGTGGCAACAAAGAAAGCCACCGAGGGTGTTCCATGTGTTGGGAAAGTGGTGAAGAAGATACCAAATTCAGTTTACGCTTCCCTTGTAACCATTGCAGCTGTGTGGTTCCAGAAAAAGGCTCAAAGTTCTTCACTGTAG 501 0.3892 MFNSYAFYTGKEWRKRQIRKITDRVFEKVQNQKESDKLSFEDLYIAVLLVYNDINKYIPGPHFDPPSKARVKEVKEKCDINLDGDIDREEFFDFILQMTADTFTVVSQKLIVTMVVAPTVAVATKKATEGVPCVGKVVKKIPNSVYASLVTIAAVWFQKKAQSSSL 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01572 166 PANTHER CALCIUM ION-BINDING PROTEIN 7 162 - -
Vimu9g01572 166 ProSiteProfiles EF-hand calcium-binding domain profile. 66 101 IPR002048 GO:0005509
Vimu9g01572 166 Gene3D - 9 111 - -
Vimu9g01572 166 SUPERFAMILY EF-hand 24 98 IPR011992 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01572 10 156 EF-hand Containing Proteins AT1G64850 65.986 3.52e-72 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01572 - - vra:106774274 264.618