Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01541 ACCTACTTCATGCTATCATTCTCATGGCCCTTCAAGCTTTTTATGGCTCTGCATGCTGTTTCCATTCCCACCTTCTTCACACTTTTTCTTCCACCATTGCATCTCCACCATTCCTTGCTGCAAGGAGCTCTAGTGCAGGATTATCTTCTGGATGCTCCAGTTTCTGTTGGAGATGGATTCTCTTTCAGTGGAGGAAAGTATTCAGAAGGGCCAAGTCCAAGTGATGAATGGTTTAAGCAGGGGAAAATGGTTAAAGCCTATTCAATTCCTGGCACCGGTGAAAAGGCAAAAGATCCAATATTTGGACTTGCTATGGGGGCTGGTTCTCAAGCTACTGGCGATCGGTTTAGGGATGTTATGTCACTCCTTCTTCGCTATATTGGTATTGAAATGCAAACCATTATTCCTTTCCATGAATTCTTTCTTGTTTTTCAAGGTTCTGAGATAAAACTTCTGCCATTAGTACTCTCCAAGGACTATCATGCCATAGCCTTTGACTGGCTAGGATTCGGGTTTTCTGATAAGCCTCAACCCAGATATGGGTTTGACTACACTCTAGATGAATATGTGTCATCATTGGAGTCACTTATTGATGAACTAGCTGCTACTAAAGTCTCTCTTGTTGTCCAGGGATATTTTTCGCCTGTTGTAGTTAAGTATGCCAGCCTTCACCAGGACAAGCTCAGCAACTTAATACTCCTTAATCCACCTCTAACAGCTCAACATGCCAAGCTCCCATCAACATTGTCCATATTCAGCAACTTTCTGCTAGGTGAAATATTTTCACAGGATCCATTAAGGGCCAGTGACAAAGCTCTAACAAGCTGTGGTCCCTATAAAATGAAAGAAGAAGATGCAATGGTCTATAGACGTCCCTATCTTACATCTGGTTCCTCAGGCTTTGCACTAAATGCAATTAGCAGGAGCATGTCGAAAGACCTCAAGAGATATGTGGAGGATATGCATAGAATATTAAAGGACAAAAATTGGAAAGTTCGAACCACAATATGTTGGGGCCAAAGAGACCGTTGGTTGAGCTTTGATGGAGTGGAGGATTTTAGCAAGGATTCCAACCACAAACTCATTGAAGTTCCTACGGCTGGTCATCATGTGCAGGAAGATTGTGGTGAAGAAGTTGGACAACTTATTTGCAGGATAATAAGCAGAAGAACCTAG 1176 0.4243 TYFMLSFSWPFKLFMALHAVSIPTFFTLFLPPLHLHHSLLQGALVQDYLLDAPVSVGDGFSFSGGKYSEGPSPSDEWFKQGKMVKAYSIPGTGEKAKDPIFGLAMGAGSQATGDRFRDVMSLLLRYIGIEMQTIIPFHEFFLVFQGSEIKLLPLVLSKDYHAIAFDWLGFGFSDKPQPRYGFDYTLDEYVSSLESLIDELAATKVSLVVQGYFSPVVVKYASLHQDKLSNLILLNPPLTAQHAKLPSTLSIFSNFLLGEIFSQDPLRASDKALTSCGPYKMKEEDAMVYRRPYLTSGSSGFALNAISRSMSKDLKRYVEDMHRILKDKNWKVRTTICWGQRDRWLSFDGVEDFSKDSNHKLIEVPTAGHHVQEDCGEEVGQLICRIISRRT 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01541 391 SUPERFAMILY alpha/beta-Hydrolases 155 389 IPR029058 -
Vimu9g01541 391 PANTHER HYDROLASE-RELATED 150 389 - -
Vimu9g01541 391 Gene3D alpha/beta hydrolase 88 386 IPR029058 -
Vimu9g01541 391 PRINTS Alpha/beta hydrolase fold signature 221 234 IPR000073 -
Vimu9g01541 391 PRINTS Alpha/beta hydrolase fold signature 334 348 IPR000073 -
Vimu9g01541 391 PRINTS Alpha/beta hydrolase fold signature 159 174 IPR000073 -
Vimu9g01541 391 Pfam alpha/beta hydrolase fold 148 373 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01541 Vimu-Chr9 24605660 24613964 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01541 - - var:108346208 605.52