Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01539 ATGGACTTAAACGGTGCTGTTGAGGACATAATCCCTTGGGATGGGACTCTATCTTCAAGTGATTTTTTCCTTTCTGCTCGTACATTTTCTGAGAAGTGGAAAATGTTCAATCCTTCCTTTCCTCCATGGCAGTGGATCCTGTGTCCTAAACAGCATTTGGTTGCTTCTCATAAGGTGGAAGGATACTTGTCCATGGAGAACATGTGCCATATCAAATCAAGTGAGGAAGAAGATTGTAATAGAAGTCTAACATGGAAAGAAGATAGCAACGATTCACAGAGAGAAGAGCCCTTTGATTGTGGCACTTTAGAACATCCACATTTGAACAGACCATGGTACAAATTACATCCATGTGGGACGAGTGAATGGATGAAGCTCCTCTACGATGGTGATTCATCTTTGAACAGAAATGGTTTTGTTATTGAACGCTATCTGGTTTCCTGGTTCTCGGTCATTGGACAAGTAGTTGGTCTCAAAATTCCTTTGGAAATGCTGGATACTGTAGTTTCTAACGATTCTTAG 522 0.41 MDLNGAVEDIIPWDGTLSSSDFFLSARTFSEKWKMFNPSFPPWQWILCPKQHLVASHKVEGYLSMENMCHIKSSEEEDCNRSLTWKEDSNDSQREEPFDCGTLEHPHLNRPWYKLHPCGTSEWMKLLYDGDSSLNRNGFVIERYLVSWFSVIGQVVGLKIPLEMLDTVVSNDS 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01539 173 Pfam Autophagocytosis associated protein, active-site domain 104 161 IPR007135 GO:0019787
Vimu9g01539 173 PANTHER UBIQUITIN-LIKE-CONJUGATING ENZYME ATG10 103 166 - -
Vimu9g01539 173 Gene3D - 63 160 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01539 K17888 - gmx:100786914 183.726