Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01536 ATGGAAGACTCGGATTCCGTTGCTACACTGATGGATTCCACAACTTCTAAGATACAACAGCTGCAGAAGGCATTTGCTGAACTTGAAAATTATCGGGCTGTTACACTTAACATGAAATGGAAAGAATTAGAGGAACATTTTCATGGTCTTGAGAAATCCTTGAAGAGGCGCTTTCATGAATTGGAAGACCAAGAGAAAGAGTTTGAAAACAAGACAATGAAAGCTCGCCAGCTGTTGGAGAAGCGGGAAGCCGCCGTTTTTGCCAAGGAGCAAGCTTCGTTCCAGAGGATTCAAGAGAAAAGAGACGCTGCTGTATTTGCCATCGTAAATGCTCGTGAAAAGCATAGGAAGATTTCATCGCGTGAATTGGGTACTGTCTCAAATGGTGGTAAAGGAGGGATAGTTGTTGTAGAGGAGAACCCTGTGGATAACGTGTCCACTGCAGCTGAAGGTAATGTGGAAGATGTAAAACTTCATGAAAATGGAAATGTGGAGTTGGTATCTTATCCAGAGTTGGTCAAATTATGCAAGGAGATGGATGCTGCTGGAATTCACAAATTCATATCTGATAACCGTAAGAACCTGGCTGCTGTAAGGGATGAAATACCAAATGCTTTAAGAGCTGCTCCTAATGCTGCCCGTTTAGTTTTAGATTCTCTGGAAGGATTTTACTGTACAGAAGTGTCAAATCAGGATGTAAAGAAGGATGCTAACTTATTGGGTCTTCGCCGAACTTGTATCATGCTGATGGAATGTCTCTGTGATTTCCTGAGCAACTCAGATTGTGTTTCTAATGTAATTTCAGAAGATATCAAGGACAGGGCAAAGGCAGTTGCTGAAGAGTGGAAACCCAGATTGGATGCTCTTGACATGGATGCTAGCAATGGGAATTCTCTGGAGGCTCATGCGTTTTTACAACTTGTAGCTAGTTTTGGTATTGCCTCTGGTTTTGATGAGGAGGAATTATCCAGATTGATTCCAATGGTATCTCGACGCCGTCAAACTGCTGATTTATGTCGTTTCCTTGGGCTGTCAGAAAAGATGTCTGGTGTAATTGAGGTTTTGGTGAACAGTGGGCGGCAAATTGATGCTGTTAACTTGGCTTTTGCATTTGATCTTACTGAACAGTTTTCTCCCGTTACTTTACTGAAGTCTTACTTGAAAGATGCAAGAAAAGCTTCTTCTCCTGTCAAAAGTGTTAACTCATCTCCCACTGCACAGATAAATGGTGGAGTTAGAGAAAGGCTGCTGACGTGGCAATTGAATATGAATGATTGTTTGGAGATGGGTAAGGAGTGTGATCATCGTCAGGAGTCTTTTATATTAGAGACTTTGAGGGGTTGTGCCAGGGACTCATCTGTTTCTGAAGAGTTTAGCTCTAGGATTACTGGGTCATCCTTTATAATGATCATTCTGGTTCCTAACAGTTCCTTAGCAGATAGAAACACTACTCTTCAAAATGTTATGAGCCCTGACCTAAAGGATATGCATGTCGTGACAGCTCGTGAAGTTTTTAATTCTCAGTGTACACTGTACACGGAGCTTTTGAATCTCTTGCTGAAGTATGGGATGACCAGGATGTGGATGGGTGGGGATGCTGACCCCTTATGGGATCAGATGGATAAAATTCTAGTTGTTTGTTTACTGGCGTCAGTTTCTGTCAAGCTGAATCAGAATAAGTGGACACATCATCCTGTTCCGCATATTGAGTTTAATGAACGGGAGCTGGTTGCTCTTAAGGCTGTAATAAAGTGCATTGAAGAACATAAACTTGATGAGCAGTATCCTCTGGATCCTCTGCAGAAACGATTAATACAGTTAGAGAAGGCGAAAGCTGACAAGAAGAGAGAAACTGAAGCAACGAAACCTCAACCCAAGAGGCCTCGCGCAAATGGTGCTGGATACGGTCCACGCGTCACTAACATCCCCTGTGATAAAACTTCGTATGCTAGAGTTGCTGACAGGTATCCACAGTATGTATACGACCGACCACCGTACATGTACCCTGCACCAACGGATAATCATTGCCCCCCTCTCATGAGCACTGCAACGTATAACATGTCTCCCAGCCTTGGCAACTACTTTGGAAATGGGTATCAGTACCAAGCCACTTATCTCCACTAG 2124 0.4303 MEDSDSVATLMDSTTSKIQQLQKAFAELENYRAVTLNMKWKELEEHFHGLEKSLKRRFHELEDQEKEFENKTMKARQLLEKREAAVFAKEQASFQRIQEKRDAAVFAIVNAREKHRKISSRELGTVSNGGKGGIVVVEENPVDNVSTAAEGNVEDVKLHENGNVELVSYPELVKLCKEMDAAGIHKFISDNRKNLAAVRDEIPNALRAAPNAARLVLDSLEGFYCTEVSNQDVKKDANLLGLRRTCIMLMECLCDFLSNSDCVSNVISEDIKDRAKAVAEEWKPRLDALDMDASNGNSLEAHAFLQLVASFGIASGFDEEELSRLIPMVSRRRQTADLCRFLGLSEKMSGVIEVLVNSGRQIDAVNLAFAFDLTEQFSPVTLLKSYLKDARKASSPVKSVNSSPTAQINGGVRERLLTWQLNMNDCLEMGKECDHRQESFILETLRGCARDSSVSEEFSSRITGSSFIMIILVPNSSLADRNTTLQNVMSPDLKDMHVVTAREVFNSQCTLYTELLNLLLKYGMTRMWMGGDADPLWDQMDKILVVCLLASVSVKLNQNKWTHHPVPHIEFNERELVALKAVIKCIEEHKLDEQYPLDPLQKRLIQLEKAKADKKRETEATKPQPKRPRANGAGYGPRVTNIPCDKTSYARVADRYPQYVYDRPPYMYPAPTDNHCPPLMSTATYNMSPSLGNYFGNGYQYQATYLH 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01536 707 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 569 631 - -
Vimu9g01536 707 MobiDBLite consensus disorder prediction 611 637 - -
Vimu9g01536 707 Coils Coil 51 81 - -
Vimu9g01536 707 Coils Coil 11 31 - -
Vimu9g01536 707 Coils Coil 597 617 - -
Vimu9g01536 707 Pfam Frigida-like protein 566 618 IPR012474 -
Vimu9g01536 707 Pfam Frigida-like protein 168 408 IPR012474 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01536 Vimu-Chr9 24539796 24543581 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01536 - - gmx:100786746 715.301