Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01530 ATGACCATGATCAGCACATCATCATTTTCTTTTATGGTTATTATGAGGACTATCTCTAATGTAGCTATGATTTCATTATCAATGATGATGTTGCTTTCCTGCACAACCCACTCTGCTGTTTTAGAGTCTGATGAAAATCATATAAAGTCAGCTACTTTTTTGTCTGAAAAATTTGAAGTGGGACCAGGAAAAATTGTGGTGAAAACGTTATTAGATATTGACTTTCCAAGGGGTCACATTGGGGTCAAGAGTTTTGATGTTGAAGTAGTTGATGAAGATGGTAATTCAGTACCTTTGTACGAAACTTACCTTCATCATTGGTTTGCTGTAAAATATATTGAAAACATTACCATGTCAGACTACATTAAACAATCTCACGACCTTAGCAATGGTATCGAATTTGAAAGAAATGATGGTGCATGCCAAGGTTTTTTGCTTCCACATTATTGGGGCTTGGGAGGAGAATCACGAGGAACGTCTTCAAATCTTCCAAATCCTTTTGCAGTTGAATTAGGTAATCCTGCAAAAATAAAGAGTGGGTTTACAGAAAAATGGTTGTTTAGCATCATGGTTATTGACACACGTGGAACACATAATAAAAAAGGTTGTACAGAGTGTAGATGTAAGCTTATGAATCTCCCAAAGGACTTTTACAATGTCACAACAGGCATTGATGGTCAATTGTTGTCTAAAAATTATAAAGGAGGACTCTTTTGTTGTCAAGATAACGTGCAATGCAAATTAAGAAATGGTTATCGTGGCCCAACAAGACAACTTTCCCTAAGATACAAAATAAGGTGGGTTGATTGGGATGAACACCAAGTGCCTCTTAAGTTCTACATACTTGATTCAACTGATCGTGTAAGATCAAATGGTTCTACAACAATTCATGATTGTCAGGCAGAGTATACGATCTCGAGAAATCATGACAATGACTTTCCTCATGTTAAGAAAGCAAACATCCCAATGACAAAAGGTGGTTATCTTATATATGGCACTGCTCATATGCACACTGGTGTTGTCAATACTACTCTATATGGACAGGATGGAAGGGTTTTATGCACTTCAAATCCAAAATATGGAACTGGAAAAGAAGCAGGAAATGAAAAGGGTTACCTAGTTGGAATGTCAGTTTGTTATCCTGAACCCGGTTCCATCAAGATCGAAGATGGAGAAATTCTAACATTGGAATCCATATATGAAAACAAATTTCGTACTGGAGCGATGGGACATTTCTACATTTACTTGGCAGAACAAATACCAAACAAATAA 1272 0.3656 MTMISTSSFSFMVIMRTISNVAMISLSMMMLLSCTTHSAVLESDENHIKSATFLSEKFEVGPGKIVVKTLLDIDFPRGHIGVKSFDVEVVDEDGNSVPLYETYLHHWFAVKYIENITMSDYIKQSHDLSNGIEFERNDGACQGFLLPHYWGLGGESRGTSSNLPNPFAVELGNPAKIKSGFTEKWLFSIMVIDTRGTHNKKGCTECRCKLMNLPKDFYNVTTGIDGQLLSKNYKGGLFCCQDNVQCKLRNGYRGPTRQLSLRYKIRWVDWDEHQVPLKFYILDSTDRVRSNGSTTIHDCQAEYTISRNHDNDFPHVKKANIPMTKGGYLIYGTAHMHTGVVNTTLYGQDGRVLCTSNPKYGTGKEAGNEKGYLVGMSVCYPEPGSIKIEDGEILTLESIYENKFRTGAMGHFYIYLAEQIPNK 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01530 423 PANTHER STRESS UP-REGULATED NOD 19 PROTEIN 19 419 IPR011692 -
Vimu9g01530 423 Pfam Stress up-regulated Nod 19 46 419 IPR011692 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01530 Vimu-Chr9 24478384 24480353 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01530 - - gsj:114405030 682.174