Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01521 ATGAAGGGTGGTGCTAAGAAAAAGGCCACGGCGGATGCTCCTGCCGAGGTGGTGGAGCCTTCTGGTGCTGCGGATTCGGGAGGTGGAGAGGGTGGAAGTGACAAAGTTCAAAGCTTTGAGGGGAACGAGGGTACCCAGTTGCGGAACGGTGAGGATGAGGAACCCCAGGTGGAGGATTCTGAAGGGGAGGGTGAGGAAGGAGAAGGGGAGGGGGAAGAAGAGTATGGTGTGGAGGGAGATGAAGAAGAGGGAAATGCTGGTGGTGCTTTTCCAGGGGCTCAAGGTGTTGTTCTTGCTGAGAATTTTTATGAAGTTGAAGCTATACGTCGTAAGAGGGTGCGCAAGGAAATGGCGGTGGAAGAGATTGTGCATTATGAATATCAAATCATGAAGGAAAAAGGGTTTAGTGTGAAAACTTTTATGAATGGGTGGCCTGAGACAGCCAACACTTGGGAGCCACCAGAAAATCTAGTTTCTGTTCCTGATATTGTTGAAGCTTTTGAGGAGAGGTCAGGAAGACACCGTAAGCGCAAACGCAAGCACGTGGTGCATCATACTCAACCCAAGAAGAGGCTGGAGCGTTCTACCACTCCATACAGTCTTCGACGCTTTTCCAGTACTGTTGGAAACCATTCACAGTCTGCTCTTCCTGTTCTTAGTGATGCTAGCCTTCCTGTTATTCCTGCCTTTCCTCAGACTGTTCTTTTTGCTGATGAACTGGGAAATGGTGCTGGCAGCAATCTTGAAAGTGCGGCACCTATTGTTGTTAACAAATCTCCAATTGTTTCAGAACAAAATGTTGAAAGGAATGAGGAAAATGATTATGATCCTAAGCTTAGTGAGCTTAAAGCCTCTTCTGCCGGTGGGAATGATGCCGACAGGCTCGCAATACGAATTCCAGAGGCAATGCCTTCTGGTCCTGGGTTTGCTGGCAATAATGGTCAAACAGCTGCTAAACCAAAGGTGGTTCGCGTGGAAACAAGTGAAAGTGGTCGCTGCCGAGGAGCCAAGAGGAGAAAATCTGGTTCTGTAAAGAGGTTCAACAAAGAGTTATATGCCGGTGAGCCTGCCAATACACAAAACCCAATTGGAGCAGCTGTTGGTACAGATGAGTCAGCACTACTATCACGGAATGCTGGTAGTGGTGGTAATCATGCCAGACCTGCTAGCAATATTGTAAAGATTATAAAACCAATAGGCTATTCAGCTTCCGTAGCCAGTGGAGCGCAGGATGTTTTGGTAACCTTTGTGGCTTCAAAGTAA 1263 0.4774 MKGGAKKKATADAPAEVVEPSGAADSGGGEGGSDKVQSFEGNEGTQLRNGEDEEPQVEDSEGEGEEGEGEGEEEYGVEGDEEEGNAGGAFPGAQGVVLAENFYEVEAIRRKRVRKEMAVEEIVHYEYQIMKEKGFSVKTFMNGWPETANTWEPPENLVSVPDIVEAFEERSGRHRKRKRKHVVHHTQPKKRLERSTTPYSLRRFSSTVGNHSQSALPVLSDASLPVIPAFPQTVLFADELGNGAGSNLESAAPIVVNKSPIVSEQNVERNEENDYDPKLSELKASSAGGNDADRLAIRIPEAMPSGPGFAGNNGQTAAKPKVVRVETSESGRCRGAKRRKSGSVKRFNKELYAGEPANTQNPIGAAVGTDESALLSRNAGSGGNHARPASNIVKIIKPIGYSASVASGAQDVLVTFVASK 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01521 420 PANTHER CHROMO DOMAIN-CONTAINING PROTEIN LHP1 1 115 IPR044251 GO:0006325|GO:0031507
Vimu9g01521 420 MobiDBLite consensus disorder prediction 54 81 - -
Vimu9g01521 420 ProSiteProfiles Chromo and chromo shadow domain profile. 103 179 IPR000953 -
Vimu9g01521 420 MobiDBLite consensus disorder prediction 303 340 - -
Vimu9g01521 420 SUPERFAMILY Chromo domain-like 96 175 IPR016197 -
Vimu9g01521 420 MobiDBLite consensus disorder prediction 1 93 - -
Vimu9g01521 420 CDD CD_CSD 103 169 - -
Vimu9g01521 420 MobiDBLite consensus disorder prediction 173 188 - -
Vimu9g01521 420 Gene3D - 94 181 - -
Vimu9g01521 420 MobiDBLite consensus disorder prediction 169 195 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01521 - - gmx:100782342 424.091