Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01511 ATGAATTACGTTATGGCAACATATAGTAAGCCCCAGGTTTCCATTCTTAATGGAATTGTCATGGGAGGTGGTGCTGGTGCTTCTGTACATGGAAGATTTCGTGTTGTTACAGAGAATACGATAAAACCTGGTAGCATCTGTGTAAGTTTCAGTAGTATGCTGGTCAGTTATTTTGAAGTACAGACATCTGCCTTGAGCACGTATGGGGATGTGTTTCTTGTCTTTGCAATGCCAGAAACAGCTTTGGGTTTATTTCCTGATGTAGGTGTGCCATATTTCTTGTCAAGACTGCCTGGCTTTTTTGGAGAATATGTTGGTCTTACAGGTGCTAGGTTGAATGGTGCAGAAATGCTTGCTTGTGGTCTTGCAACACATTTTGTTCCTTCATCGAAACTGTCTTTATTGGAAGAAGCATTATGCAAGGTAGAAACTAGTGATCCAAATGCAGTGTCTGCTATTATCGATAAGTACTCAGAACAACCTTTCCTAAAAGACGACAGTGTTTATCACAGGTTGGAGATAGAAGCTACAAGTAAGGCTGATCATTGGATTTCTGAAACTGTTCAAACCTTAAAGAAAGCATCTCCAACAAGCCTTAAAATCTTTCTTAGATTGATTAGAGAAGTTCGGCTCCTAGGTATTGGTCCAAGCCTTGTTCTTGAATATAGAATTGTTTGTCATATTCTAAAAGGACACTACAGCAAGGATTTCTTTGAGGGTTGTAGGGCTATACTTTTAGATAAGGACAGGAACCCCAAGTGGGAACCTTCCAAATTGGAGCTTCTCAGCGATAGCGATGTCGACCGTTACTTCTCCAAACTCGATGATGAAGAATGGGAAGAATTGGAACTTCCTAAAAGGTTAAAAAATCTGCCTACATATGCTATTGCAAAGCTGTAA 900 0.4 MNYVMATYSKPQVSILNGIVMGGGAGASVHGRFRVVTENTIKPGSICVSFSSMLVSYFEVQTSALSTYGDVFLVFAMPETALGLFPDVGVPYFLSRLPGFFGEYVGLTGARLNGAEMLACGLATHFVPSSKLSLLEEALCKVETSDPNAVSAIIDKYSEQPFLKDDSVYHRLEIEATSKADHWISETVQTLKKASPTSLKIFLRLIREVRLLGIGPSLVLEYRIVCHILKGHYSKDFFEGCRAILLDKDRNPKWEPSKLELLSDSDVDRYFSKLDDEEWEELELPKRLKNLPTYAIAKL 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01511 299 Pfam Enoyl-CoA hydratase/isomerase 167 271 IPR045004 -
Vimu9g01511 299 Pfam Enoyl-CoA hydratase/isomerase 1 41 IPR045004 -
Vimu9g01511 299 Pfam Enoyl-CoA hydratase/isomerase 74 164 IPR045004 -
Vimu9g01511 299 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 1 296 IPR032259 GO:0003860
Vimu9g01511 299 SUPERFAMILY ClpP/crotonase 74 257 IPR029045 -
Vimu9g01511 299 Gene3D - 72 287 - -
Vimu9g01511 299 Gene3D - 1 42 - -
Vimu9g01511 299 CDD crotonase-like 5 139 - -
Vimu9g01511 299 SUPERFAMILY ClpP/crotonase 2 41 IPR029045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01511 Vimu-Chr9 24247457 24259368 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01511 1 299 Miscellaneous Gene Families AT5G65940 57.233 6.98e-125 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01511 K05605 - gmx:100170729 438.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g01511 9 24247457 24259368 Vimu9g01511 9 24247457 24259368 ECH