Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01502 ATGCACTCTGACATAGATGGACACACACCAGAAGACATGTTAGAAATTGAGCATGATGGAATGCTTAAAGAGGCACAAAAATGGTTGAAGGAAACAGCTCAATCATGTTCCACTGTTGCTATTCTGGTTGCCACAGTTGTATTTGCTGCTGCATACACCATTCCAGGTGGAACTGAAAATGGCACTCCTGTGTTTCTCCATTCAAGCGAGTTTCTCTTTTTCACCATCATGGATGTTGTGGCTCTTGCTACCTCACTTGCTTCAGTTGTGGTCTTCCTTTCCATTCTCACTTCTCCATGTGAGTTATGGGATTTTCACAAGTCTCTCCCAAGAAAACTCAATTTGGGATTTGCTTTGTTGTTCTTATCATTGATGACGACAATGCTTGCATTCAGTGCAACCATGTTGTTGACCATTCGATTGGAATGGAAGAACTGGACTTCCACATTGATATACAGTGCTGCTTTCTTTCCTGTCACCATTTTTGCAATCATTCAGTTTCCTGTTTATGTGATGGTTCGAAGCATCACCAAGCATCTTTGGAAGCAAGTTAAGAAGGTTTTTCCAACAAGATTGATTGAACACTGCATGAGTAACTGTTGA 603 0.4113 MHSDIDGHTPEDMLEIEHDGMLKEAQKWLKETAQSCSTVAILVATVVFAAAYTIPGGTENGTPVFLHSSEFLFFTIMDVVALATSLASVVVFLSILTSPCELWDFHKSLPRKLNLGFALLFLSLMTTMLAFSATMLLTIRLEWKNWTSTLIYSAAFFPVTIFAIIQFPVYVMVRSITKHLWKQVKKVFPTRLIEHCMSNC 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01502 200 PANTHER CASKIN 8 177 - -
Vimu9g01502 200 Pfam Domain of unknown function 26 136 IPR026961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01502 Vimu-Chr9 24182820 24183422 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01502 19 139 Miscellaneous Gene Families AT3G09550 32.540 8.56e-13 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01502 - - vun:114166816 381.333