Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01471 ATGTCAACAACAACAAACCAACAAACTTCTCCAGTTCCTCTTCATCTCGAGTCATCGCATGATGTCCCACCGTTACAATATTCGAATCGAGTCCAAATCAAGACTTTGCTGGGTCGATCAAATAGTGTGGTGGGACAACGCGTTACTGTTGGTGGATGGATAAAATCTGCCAAGGAAGTTGAGAAAGCGGTTGTGTCATCTTCGTTGTCGTCGTCTGCGGCAACTAATGACGCAGTCAAAAATTATAAAGGCAAGGATGTTTCGTGCGTGGAGATTCTGCAATCGAAGATACCTTTGATAAGGAGCATATTGGATGTATTTGGAGGAAGCGGTTACGTGCAGCGCAAGAAACGTGAGTCTGTTGTGACTGAGCCCAATCATGCAACGCTTTTGCCTCCAAAAGCTTCTATTGTGTATTTGCTTCTCACGGATGGGTCATGCGTTCAAAGCCTTCAGGTTGTTGTGGATTCGTCTCTAGCAAGCCCAAGTAGGGTTATGGCTACTGGGACTTGTCTATTAGTGCAAGGTCAGCTAGAACGTACATCAGAAGGGAAGCATGATATTGAGCTTAAAGCTGAAATAATTCTTCATATTGGAACAGTTGATTTTGACAAGTACCCATTATCAAAGAAACGAATTCCACTAGACACATTGAGAGATTACTCCCACTTTCGCCCTCGAACTACCACGGTGGCAACTTTGATGCGGATTCGTAGTGCTCTCTCTTTTGCAACCCACACATTTTTCAATAAACATGAATTTATTGATGTGCAAGTACCCATTATAACTACCACAGACTCAGAAGGATTCAGCAACATGTTTAAGGTTACCACATTGGATCAGAATCAGAAAGCAGAGAAGAAGGAGAAACTAGAGACCATTTACGAGAATGAAGGTGTTAGCCTTGAACATGTGAAGGCAGCTGTGAAAGAGAAAAGCAACATAGTTGCGCATTTGCAGAGAACTGAGAGCAATAGAGAAGCACTGGCTGCTGCAGTTCAGGATCTGAAGAAAACAAATGACCTGGCATCACAGTTAGAAGCAAGAGAAAAGAGAAAGTTAGGAACATCTTTTAAGGATGATAAAATAGACTCTTCCAATGATTTTTTCCCTTTCCAAACTTATTTGACTGTCTCTGGTCGCTTGCATCTGGAGAGTTATGCATGTGCTCTTGGAAATGTCTACTCTTTTGGACCTAGATTTCTAGTAGATAAAACAGATTCTGCTAAACTTGCTGCAGAAATGTGGATGGTTGAGGTGGAAATGGCTTTTTCTCAGTTACAGGATTCCATGAACTGTGCTAGTGACTTTTTCAAGTACCTCTGCAACTGGGTTCTTGAAAATTGCTCTCAAGAAATGGAATTTGTTCGTAAAAGAATTGACACCACCTGTTCCAATCGTCTTAATCAGATTATATCAGGTTCTCTTAAAAAGTTGACCTACCATGAAGCTATAGAAGCTCTTAAAAAGACTGAAGATAAGAAATATGAAACAAACTTTGAGTCAGGTTTTGTACTCACTTCAGAGCATATAAGCTTTCTCGCTGAAGCCATCTTCAAGAATCCGATTATAATATACAATTATCCAAAAGAAGCTAAGCCATTTTACGTTCGCCAGAATGATGATGGAACTGTTGCTGCATTTGACTTGTTTGTCCCAAAGCTTGGAACAGTAATTTCAGGTAGCCAAAACGAGGAACGTCTTAACATGATAAGCTCCAGGATTGATGAATTAGGTTTGGAAAGAGAGAAGTATGAATGGTACTTAGACCTTCGTAGGAATGGAACAGTGATTAACTCTGGATTCACCCTAAGGTTTGATCTTATGGTTCTCTTTGCAACTGGCCTTGCTAATGTCAGGGATGTTATCCCTTTTCCAAGAAGCTATGGCAAAGCTAACAACTGA 1905 0.4084 MSTTTNQQTSPVPLHLESSHDVPPLQYSNRVQIKTLLGRSNSVVGQRVTVGGWIKSAKEVEKAVVSSSLSSSAATNDAVKNYKGKDVSCVEILQSKIPLIRSILDVFGGSGYVQRKKRESVVTEPNHATLLPPKASIVYLLLTDGSCVQSLQVVVDSSLASPSRVMATGTCLLVQGQLERTSEGKHDIELKAEIILHIGTVDFDKYPLSKKRIPLDTLRDYSHFRPRTTTVATLMRIRSALSFATHTFFNKHEFIDVQVPIITTTDSEGFSNMFKVTTLDQNQKAEKKEKLETIYENEGVSLEHVKAAVKEKSNIVAHLQRTESNREALAAAVQDLKKTNDLASQLEAREKRKLGTSFKDDKIDSSNDFFPFQTYLTVSGRLHLESYACALGNVYSFGPRFLVDKTDSAKLAAEMWMVEVEMAFSQLQDSMNCASDFFKYLCNWVLENCSQEMEFVRKRIDTTCSNRLNQIISGSLKKLTYHEAIEALKKTEDKKYETNFESGFVLTSEHISFLAEAIFKNPIIIYNYPKEAKPFYVRQNDDGTVAAFDLFVPKLGTVISGSQNEERLNMISSRIDELGLEREKYEWYLDLRRNGTVINSGFTLRFDLMVLFATGLANVRDVIPFPRSYGKANN 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01471 634 Gene3D Bira Bifunctional Protein; Domain 2 207 633 IPR045864 -
Vimu9g01471 634 MobiDBLite consensus disorder prediction 1 21 - -
Vimu9g01471 634 MobiDBLite consensus disorder prediction 1 15 - -
Vimu9g01471 634 Pfam tRNA synthetases class II (D, K and N) 365 627 IPR004364 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Vimu9g01471 634 SUPERFAMILY Class II aaRS and biotin synthetases 196 630 IPR045864 -
Vimu9g01471 634 PANTHER ASPARTYL/LYSYL-TRNA SYNTHETASE 26 629 - -
Vimu9g01471 634 Pfam tRNA synthetases class II (D, K and N) 216 279 IPR004364 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Vimu9g01471 634 Coils Coil 319 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01471 Vimu-Chr9 23635065 23639707 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01471 K01893 - gmx:100787363 955.666