Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01470 ATGGATGTAATAAGAACAAAGAAAAGAGCTGATGTAGATATTGGAGATGAAGGAGAAGACTTGGTTCTAGCAACTCTTGTTGCCAATGGAGATGACATTAGTCCTCTTGTGAGGCATGCCTTCGAAATGGGGCGCCCCATGGGGCTCCTGCGCCAACTGGATTTTGTGGTGAAGAAAAAGGAAGCTGAAATCGAGGCAATGTGCAAGACACACTATGAGGAATTCATCCTTGCAGTTGATGAACTTCGTGGTGTGTTGGTTGATGCTGAAGAGCTCAAGAGTGAACTGCAAAGTGACAATTTCAAGTTGCAGCAGGTTGGCAGCACCCTTCTTGTCAAGCTCGAGGAGCTTTTTGTGTCATATACAGTGAAGAAGAATGTGACAGAAGCTATAAAGATGTCGAAGAACTGTATGAAAGTTTTGGAGCTTTGTGTTAAGTGCAACAATCATATTTCTGCAGGGGAGTTTTACCCTGCTTTGAAAACTGTTGATTTGCTTGAGAAAAGTTACATAGAGAACATTCCTGCCAAGGCTCTCAAAAGGGTGATAGAGAAGAGAATTCCTTCCATAAAATTACACATAGAGAAGAAAGTATGCAGCCAGGTTAATGAATGGATGGTCCAAATACGAAGTTCTTGTAAAACAATTGGGCAAACTGCAATTGGTCGTGCTGCATCGAATCGCCAGAGGGATGAGGAAATGCTTGAAAGGAAGAAAAAGTCTGAAGGATTGAACATGTCAGGAGTTGAGGATCGAGCTTTTAGTTTGGTGGTTGAAGAAGATGAAGATTCTGCCATGAAATTTGATCTCACGCCCTTATATCGTGCTTGTCATATTCATAGTTGCCTTGGGATCCTAGAGCAGTTTCATGAATATTACTACAAGAATAGATTGCTACAATTGAATTCGGATTTGGAGATATCTTCAATGCAACCTTTTATCGAGTATTATCAGACATTTTTGGCTCAAATTGCTGGTTACTTCATAGTGGAGGATAAGGTCCTGAGGACTGGTGGTGGGCTCCTAGAACCTGATCAAGTTGAAACTATGTGGGAAACTGCTTTGGAAAAGATAACATCAATGTTAGAAGTGCAATTGCCCCAGATGAAATCTGCCACACATCTTCTCCTGGTTAAGGATTATGTTGCACTTCTTGGGTCTACTCTTAGACAATACGGATATGACATTGGCCAACTCCATGATGTGCTTGATAATAGCCGTGAAAAATACCACAGGCTTCTTTTGGAAGAATGTAGGAACCAAATCGTTGATGTTCTTGGCAGTGACACATACGAGCAGATGGTGATAAAAAAGGATTCTGATTATGAGAACCATGTTCTGGCCTTTAATCTTCAAACATCAGATATCATGCCTGCTTTTCCATATGTTGCATCATTCTCCTCCATGGTACCTGATGCTTGTCGCATTGTGAGATCCTTCATCAAAGGCTCTGTTGATTACTTGTCTTATGGTGTACGAACCGGTTTGTTTGATGCTGTGAGGAAGTATTTGGACAAGTTCTTGATTGAAGTGTTGAATGAATCTTTGCTTGACATCATCAACAGTGCAAGTATCAGTGTTTCTCAGGCCATGCAGCTTGCTGCAAACATAACTGTTCTTGAAAGAGCTTGTGATTTTTTCCTTCGACATGCTGCTCATCAGTGCTGCGTACCCGTTAGAGCAGCTGAGAAG 1692 0.4155 MDVIRTKKRADVDIGDEGEDLVLATLVANGDDISPLVRHAFEMGRPMGLLRQLDFVVKKKEAEIEAMCKTHYEEFILAVDELRGVLVDAEELKSELQSDNFKLQQVGSTLLVKLEELFVSYTVKKNVTEAIKMSKNCMKVLELCVKCNNHISAGEFYPALKTVDLLEKSYIENIPAKALKRVIEKRIPSIKLHIEKKVCSQVNEWMVQIRSSCKTIGQTAIGRAASNRQRDEEMLERKKKSEGLNMSGVEDRAFSLVVEEDEDSAMKFDLTPLYRACHIHSCLGILEQFHEYYYKNRLLQLNSDLEISSMQPFIEYYQTFLAQIAGYFIVEDKVLRTGGGLLEPDQVETMWETALEKITSMLEVQLPQMKSATHLLLVKDYVALLGSTLRQYGYDIGQLHDVLDNSREKYHRLLLEECRNQIVDVLGSDTYEQMVIKKDSDYENHVLAFNLQTSDIMPAFPYVASFSSMVPDACRIVRSFIKGSVDYLSYGVRTGLFDAVRKYLDKFLIEVLNESLLDIINSASISVSQAMQLAANITVLERACDFFLRHAAHQCCVPVRAAEK 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01470 564 Coils Coil 79 99 - -
Vimu9g01470 564 PANTHER SEC15 15 563 IPR007225 GO:0006886|GO:0090522
Vimu9g01470 564 FunFam Exocyst complex component 396 564 - -
Vimu9g01470 564 Gene3D - 396 561 IPR042045 -
Vimu9g01470 564 Pfam Exocyst complex subunit Sec15-like 442 553 IPR046361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01470 Vimu-Chr9 23627628 23629913 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01470 K19985 - gmx:100796988 978.778