Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01460 ATGTTTTTTTCTTCAGAGTTTTTGAAGGCAAAGTGCTTAATGAACTGTGAAGTTTCCTTGATTCTTGAGCACAAGTACGAGCAGCTTCAACAGACCTCTGATGATCCCATGAATCAAGTTTCTCAGGTATTTGAAAAGTCATTGCAGTATGTGAAGCGATTCAGCCGCTATAAAAATCCAGATGCTGTTAGACAAGTTCGAGAAATACTTGCAAGATATCAATTGGCTGAGTTTGAGTTGTGTGTCCTTGGCAACCTTTGCCCAGAAACTGTGGAGGAAGCTATTGCTATGGTTCCATCTATCAAGACAAGAGGACGGGCTCAGGATGATGAAGCAATTGAGAAAATGTTGAATGACTTGTCATTGATTAAGAAATTTGAATAA 384 0.3906 MFFSSEFLKAKCLMNCEVSLILEHKYEQLQQTSDDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAQDDEAIEKMLNDLSLIKKFE 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01460 127 Gene3D - 1 127 IPR038324 -
Vimu9g01460 127 SUPERFAMILY HRDC-like 4 125 IPR010997 GO:0000166|GO:0044237
Vimu9g01460 127 PANTHER DNA-DIRECTED RNA POLYMERASE II 3 127 IPR045222 -
Vimu9g01460 127 SMART rpol4neu2 5 127 IPR006590 -
Vimu9g01460 127 FunFam Dna-directed rna polymerase ii subunit 4 1 127 - -
Vimu9g01460 127 Pfam RNA polymerase Rpb4 12 121 IPR005574 GO:0006352|GO:0030880
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01460 Vimu-Chr9 23452879 23454986 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01460 K03012 - gmx:100527316 241.506