LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu9g01367	ATGGTTGAAGTTGAAGAGGTAGAGCTCGATTTGGCGCTCTCCATTGGAGGCTCCTTTGGCAGGCACACCGTCCACACACCACCTCCGGATTCCAAACCCGACTCCTTCACGCGCCTCCCGGTGGACCCTCACGACAAGCGTGTGATTCAAGCGCTGCGGAGAATGGAGGCCAAGAAGAAACGAGAGCAGAAGAGGGAGCGCGTCAGAGAGACGGAACCCGACTGGGAACAGGTTTTTAAGAAGGAGAAAACGGAATGCCACAAACCAGTTACTGCCTTTGGCCCGTGGAAAACCGCCGAACCCTTCCGCGTTCACCAGTTCGCCACGGTCCAGTACTTGCCATTGAATAACGGCTTTCCGTTACCGTGCTGGGTCGGAAGCCAGAAACATGCAGGTGGAGTTGACGGCGGTAACGGTTGTGATAAGAAAACGGAAAAGTCTAACGGCTCTTCTAAGTGCAGCTCTTCTGCGGTTTCGGATTACCAAAGCTCTTCTCATGAAGATGGGGGAAGCAGTGATAGCCACAGCCATTCAGTTCATTCTTTGGCAGAGCAACCCCATTTGACCACTTCCAAGGAAACAAGCATAGGAACCCAACCTGAAGAAAGTGCTTCTGCTTCATCTCACCCCATGAAAGCCAAACAAGGCAACAAAACGGAGGAAAGAAAGCACATTGCAAAGGAAGCTCAACCAAAACCAAACCCCTCTTCACCCGAGCATATGAAAATCAAGCAAGAAACTCCCACAAGCCACGATGCAGTTCTAACAATGGCAGTTGAGAACAAGTCTTTGTCGAACGAAAACTCAGCCCCCTTGATGGAGGCGAAAGGTGAGCTGGGAAAGCCTCCGAAGCCTCTCTCTCACACATCTTTACTCCCTCAAATGCCTTATGTGTCTGCAAAAGGGAACAATGGGAAAACTGTTCATGGGTTCCTATACAGATATAACAAATCTGAGGTTAGCATTGTTTGTGTCTGCCATGGAAGCACATTTTCACCTGCTGAGTTTGTGCAGCATGCAGGGGGCACAGATATCACACACCCTTTGAGGCATATCACAGTAATTCCTTCTGCCTTGGGTTGA	1083	0.5014	MVEVEEVELDLALSIGGSFGRHTVHTPPPDSKPDSFTRLPVDPHDKRVIQALRRMEAKKKREQKRERVRETEPDWEQVFKKEKTECHKPVTAFGPWKTAEPFRVHQFATVQYLPLNNGFPLPCWVGSQKHAGGVDGGNGCDKKTEKSNGSSKCSSSAVSDYQSSSHEDGGSSDSHSHSVHSLAEQPHLTTSKETSIGTQPEESASASSHPMKAKQGNKTEERKHIAKEAQPKPNPSSPEHMKIKQETPTSHDAVLTMAVENKSLSNENSAPLMEAKGELGKPPKPLSHTSLLPQMPYVSAKGNNGKTVHGFLYRYNKSEVSIVCVCHGSTFSPAEFVQHAGGTDITHPLRHITVIPSALG	360

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu9g01367	360	MobiDBLite	consensus disorder prediction	214	229	-	-
	Vimu9g01367	360	PANTHER	AFP HOMOLOG 2	4	358	IPR031307	GO:0007165
	Vimu9g01367	360	MobiDBLite	consensus disorder prediction	18	41	-	-
	Vimu9g01367	360	Pfam	Ethylene-responsive binding factor-associated repression	3	25	IPR012463	-
	Vimu9g01367	360	MobiDBLite	consensus disorder prediction	132	250	-	-
	Vimu9g01367	360	MobiDBLite	consensus disorder prediction	149	213	-	-
	Vimu9g01367	360	Pfam	Tify domain binding domain	320	353	IPR032308	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu9g01367	Vimu-Chr9	21968126	21970358	Dispersed/Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu9g01367	-		-	gmx:100809595	399.438