Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01346 ATGAGATGTTTGTTAGTGTTTTCTTTGGGAATTTTCATCCAAGTCAGTTACTGTCATAGCAGCATTACAACATGCTTGCCTGAGAAAAATGCTGCACTATTCATACTTGGAGATTCACTATTTGATAATGGAAACAACAACTACATCAACACCTCCACCGCTTACCAAGCAAACTATTATCCCTATGGAGAAACTTTCTTCAAATACCCCTCTGGCAGATTTTCTGATGGACGCATGATACCAGATGTCGTTGCTGAACTTGCTAAGTTGCCAATACTACCACCATACTTGCATCCGGGTCGTGTTGAACACGTCTATGGTGTCAATTTTGCTTCAGGAGGTGCTGGTGCTCTGCGTGAAACCGCTCAAGGATTTGTTATAGACCTGAAAACTCAGGTAAGTTATTTAAAAAAATTGAAGAATATGTTGAGTGAGAGACTGGGAAAAGCAACGGCAGAGGAAATTGTGTCAAAATCTGTGTACTTGATTAGCATTGGATCCAATGACTATGGCTCTCTTCTCAACCCAGACTCAAATCCTGTGTTTCCTCCTGGTGATCATCAAGGGTTTGTAGATTCTGTAATTGGAAACCTCACAGATGCCATAAAAGAAATTTATAATCTTGGCGGAAGGAAATTTGGATTTGTTAACGTGGGTGCAATAGGTTGTTCACCTGGAATAAGGGTTTTGGTGAATAATGGAAGTACATGCTTTGAAGAAGTACTAGTCATCGCAAGACTACACAACACTGCACTCTCAAAAAGGATTCATGAGCTAAAGAAACAGCTCAATGGATTCAAATATTCAATCACTGATTTCTATTCTACATCTCTTGAAGTGCTGAAGAATCCTACAAAATATGGTTTCATAGAAACAATTGTGGCATGTTGTGGAGGTGGACCATTCAGAGGAGATGGTAGCTGTGGAGGAAGGAAAGGGATCAAAGAATACGAGTTATGTAACAATGTCAATCAACATCTGTTCTTCGATTCTGTTCATCTTACTGACAGAGCTAGCCAGCATTTTGGAGAGCTGATATGGAATGGAAATCACACTGCCACAAGCCCTTACAATCTAAAACAGCTATTTCAATTTTAA 1098 0.3962 MRCLLVFSLGIFIQVSYCHSSITTCLPEKNAALFILGDSLFDNGNNNYINTSTAYQANYYPYGETFFKYPSGRFSDGRMIPDVVAELAKLPILPPYLHPGRVEHVYGVNFASGGAGALRETAQGFVIDLKTQVSYLKKLKNMLSERLGKATAEEIVSKSVYLISIGSNDYGSLLNPDSNPVFPPGDHQGFVDSVIGNLTDAIKEIYNLGGRKFGFVNVGAIGCSPGIRVLVNNGSTCFEEVLVIARLHNTALSKRIHELKKQLNGFKYSITDFYSTSLEVLKNPTKYGFIETIVACCGGGPFRGDGSCGGRKGIKEYELCNNVNQHLFFDSVHLTDRASQHFGELIWNGNHTATSPYNLKQLFQF 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01346 365 Gene3D SGNH hydrolase 26 351 IPR036514 -
Vimu9g01346 365 Pfam GDSL-like Lipase/Acylhydrolase 33 346 IPR001087 GO:0016788
Vimu9g01346 365 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 12 364 IPR044552 -
Vimu9g01346 365 CDD SGNH_plant_lipase_like 32 350 IPR035669 -
Vimu9g01346 365 SUPERFAMILY SGNH hydrolase 33 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01346 Vimu-Chr9 21723406 21725676 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01346 32 364 Acyl Lipid Metabolism Gene Families AT4G10950 31.686 1.02e-45 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01346 - - gmx:100808852 590.497