LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu9g01337	ATGGGTCTTCCTCCCAAAGCTGCTTTCCCTCTCTCTCTTTTCCTTCTTCTTTCTCTTCTTCTACTCTCTCTGGTTTTAGCCACAACAACACAACAAGAAGAGTTCTCGGAAGAGTTGCTGCTGAAGCCCTTGCCCGATCGCAAGATTCTCGCGCATTTCCACTTCCAAAATGAAGCTCCTTTCGACGCCGATTCGTTCGCTCGTCACCATCACCTCTTCCCCAAATCTATTTCTCAGCTGGGAAGCATATATGGCTGCTCTGCTGCTGCAAGTAGTTATTGGTGGTTCTTCCTTGCTTACCCATTAGTTTTTGCTGCTTTTTGTGCTTTTACTCTGGTTCAGAAGTTTCATATTAAGTCAATGGAGTTATCTTTTACACAAGGTCGATGGAACTATGAAAGATGGGGTGGATTTGATCCAATATCAAGTCATAATGCAAAGCCTCCAGGAGTTGAATTGTGGGCAGTTTTTGATGTCCCTCCACATCAGGTTGATGCTTCTTGGAAAAATTTAACCCATTCACTATCAGGTCTCTTTTGTGCTTCCATCAACTTCCTGGAGTCTTCTACAACGTATTCAGCGCCTGAATGGGCATTTCAATCAGCTCTGGGTAGTTTAAGATATGGTACACTGCCACGTGAAGCTGTCTGCACTGAGAATCTTACACCCTGGTTGAAACTCCTTCCCTGTCGAGATAAAGCTGGTCTCTCTTCCTTAATGGATAGACCATCTATTTACAGAAGCTTTTACCACTCCCAGCGGTTGCACTTGACAATGTCCTCTGCTCCTTCAGATGGGTCAAGATCAGGAATTATTCTAGAACAAACACTTACAGTTGTACTCCAGCCTAATGATCGGAATGCTGATATGAACCATGTGAGCAAAGCAAAGATACAACCAAGCTGGTCCCTGAGTTCAATATTTGGAAGAAAAATCAGTGGAAGATGTGTCCTTGCCAAGCTGAGTAATGTTTACCTTCATGCTGATAAAGGTCTAGTTGCTCAACTTGAGAATCTCCATAAGAATACTGCTCAATTTGCTAATAATGACACAGGTCCTGAAGATTATAGAGTGAACATTGGCTTTAAATTGTCTGTTACTCCCAAAAGGGTGCATACAGAATTGGGAAAGGACTCCTCAATTCTGTATGAATACCCAATCAAAGATTACAAGGATACTGAACAATTTGATTTAGGCCTATCGTGGGAGCATCCAATTGTTTGGTCCAGTCCACATGCACCTTTTTATGCTAGTAGATTTTTGATGGGAAGTGGAAATGAAAGGGGTGCTATTGCAATATCCTTGAAATCAACAGAAATGACCCAGGGACTTATAACCAATAATATTGAAGAGAGGTGTAAGTTGCAAGTTAATGTTCTCCAAGTTGTGCCTTGGTATGTTAAAGTATATTATCATACTTTGCAATTATTAGTTGATGAAAGACCTCGAGTACTCACAGATTTTGTTGAGAGAATGCGTGTTTCACCTTCTGAAGACAAAGTATCCCCAGGGATGATGGAGCTAGTCCTCCAATTTCCTTGTGAAATGAAGTCAGCTGTATTGAGTATAGAGTTTGACAAGGGCTTCTTGCACATTGATGAATACCCTCCAGATGCCAATCAAGGATTCGACATTCCATCCGCAATAATAAGCTTTCCTGACTTCAATGCTGGTTTGCAATTTTTTGATAAATCTCAAAGCAAGTCACCGCTGTTGTCTAAATTACAGGAAAAGAGTCCTGTTCTCTCTTACACAGAAGTTTTACTTGTACCCTTGACGACTCCTGATTTCAGTATGCCATATAATGTCATCACAATTACATGCACAGTTTTTGCGTTGTATTTTGGATCTTTGGTAAATGTTCTCAGAAGACGAGTTGGAGAGGAGGAAAGACTTTTGAAAAACAAAGATGCAAGCAAAGCTGTTTTCCTTCGTCGAGTACTAACTAAATTATCTGCCAAGCTTAGAGGCAGACCATTGGAATCAACTACGTCCCCTTCATCATCATCATCCTTTGTTAGTCCAAAATTGATTCTCAAAGTATTACTGGTTGCAGGAATTGCAATTGCATGGCAATACTACTCACAATAA	2091	0.4094	MGLPPKAAFPLSLFLLLSLLLLSLVLATTTQQEEFSEELLLKPLPDRKILAHFHFQNEAPFDADSFARHHHLFPKSISQLGSIYGCSAAASSYWWFFLAYPLVFAAFCAFTLVQKFHIKSMELSFTQGRWNYERWGGFDPISSHNAKPPGVELWAVFDVPPHQVDASWKNLTHSLSGLFCASINFLESSTTYSAPEWAFQSALGSLRYGTLPREAVCTENLTPWLKLLPCRDKAGLSSLMDRPSIYRSFYHSQRLHLTMSSAPSDGSRSGIILEQTLTVVLQPNDRNADMNHVSKAKIQPSWSLSSIFGRKISGRCVLAKLSNVYLHADKGLVAQLENLHKNTAQFANNDTGPEDYRVNIGFKLSVTPKRVHTELGKDSSILYEYPIKDYKDTEQFDLGLSWEHPIVWSSPHAPFYASRFLMGSGNERGAIAISLKSTEMTQGLITNNIEERCKLQVNVLQVVPWYVKVYYHTLQLLVDERPRVLTDFVERMRVSPSEDKVSPGMMELVLQFPCEMKSAVLSIEFDKGFLHIDEYPPDANQGFDIPSAIISFPDFNAGLQFFDKSQSKSPLLSKLQEKSPVLSYTEVLLVPLTTPDFSMPYNVITITCTVFALYFGSLVNVLRRRVGEEERLLKNKDASKAVFLRRVLTKLSAKLRGRPLESTTSPSSSSSFVSPKLILKVLLVAGIAIAWQYYSQ	696

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu9g01337	696	PANTHER	GPI TRANSAMIDASE COMPONENT PIG-T-RELATED	111	661	IPR007245	GO:0016255\|GO:0042765
	Vimu9g01337	696	Pfam	Gpi16 subunit, GPI transamidase component	20	80	IPR007245	GO:0016255\|GO:0042765
	Vimu9g01337	696	Pfam	Gpi16 subunit, GPI transamidase component	111	643	IPR007245	GO:0016255\|GO:0042765

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu9g01337	Vimu-Chr9	21633254	21637274	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu9g01337	K05292		-	gmx:100794356	1093.57