Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01321 ATGAATGGATATAAATCAGGTTCTGCTCTCCTTGTAAATGCTGAGGTTGATTCTATGGGAGGAGTTGTTGATGGCGGAATTGGGATAGGTTTGAAAATCTCTCCGCGCAGAGCAGCAATTGAAAAGGCTCAAGCAGAGCTCAGAGAGGAGTATGATGCTCGTGAAGAAAGAAGAAGAGAGCTTGAATTTCTTGAAAAAGGTGGGAATCCTTTGGACTTTAAGTCTGGGAATGCTGCTTCAGTTAGTGTGCAGTCTACTTCAATCACTGATCAGCCTCATGAGCAGTTTGTGACCAGTGAAGCAAAAGGTAGTTTTGCATTGACTGCCTCCCCTCATGCTGATTCTGTTGACAGTAGTGCTAGACCAGGGGCTCCTTTGGCTAGTGAACCTAATACTGCTGATAATCTGCAACTTTTTGACGGGGAGAATGAGTTGCCTGACACTGAAAAGAGGTGCTTGAATAGGAGGAATAATATTGCTGTGTCAGAACAATCTTCCCAAATTGATGGAAGTCAAAATGCTAAGGAGACTGAAGATTCAGCTATTTTCGGGCCATATGCAAGAAGGAATAGATCTAGACCAATTCATGGTCCACGAGGGCCTTCAAGGGAAGCAAAGGGGTTACTGTTAGAAACAGATAACCAAAAGAACCCTAATTTACCAACCATATCTAAGCCCGAGCCTTCCAGTTTAAATTGTGGTATTGGTACTAAAAGTTTAACGACTAATAATACACTGAATGATGAGTTTCTTGGGATCCGAGATCACCAATCCACTATTGGTAGTGCTAGTGTTCCCAAAGACAAATTGGATATTACAGTGAACATAAACTTAAAAGAAAATCGTGAAACCCTACCTTCTGAAGATAATACTGTTCAAAATCCAATTCTCATGGCTACTGGAGAAGCTAATGTGGTTGAACTAAGCAAACCAATAGGTGTTGCCAATAGTGACTCTCCATCTCACAGACCTACTACTAAAGCTGAAAATGGGCCTTATGACTGTCAGCCAAATGGATTTGGCAATGTAGAAGTAGACAGGAAAAGTGTAACAAATGAAGGCCAAAATAACATTGCTAGATTAGGCAAGAAGAGTTTCGGTTTAGGGTCCTCGTGCTCACAAACTAGTTTTGGTAGGCATGTAAATAATGATAGTGATATGTGTACTAATACAAAGAGTGTTGACGCTAATGAAAATACCATGGAACAAACATTTACATTAGAGAATAAGCTGAAATCTGCCAACTGTGAATTTGTGAAAGATAGGCATAAGACCAAAAATGGTGCTATTGTTAGCAATGAACATGATGCTGATTGTCCAGATCATTCTGGTAGTGATAATATCATCAAAGCTGAGGAAGATTTCCATATTAATAGTTCTTCCATGTCAAATATCAAGGGAGTACACAACGACAGTACCACACCAAAAGCTGATAAAGATACTGTCTTAGTGGATCAGTCCAATTCTGTCAAGGAAAGCAGCTCAGAAAGACATCAGGTTCCTGTGGATGTGTCACTATCAGAATCTCCTCAGACTGTTCTAGCTGAAAAGGTAAAGAGTGCCACCTCTGATGATCAACCATGTGCCATGCACAATATGAAGTTAGTAGACAAGGCCCGTGAAGATTCTATTTTGGAAGAGGCTCAAATTATAGAGGCCAAGCGAAAGAGAATTGCGGAGTTATCTCTTCGCTCGTTACCAACACAGAACCACAGAAAGTCACATTGGGGTTTTGTTCTTGAGGAAATGGCATGGCTGGCAAATGATTTTGCTCAGGAGCGTCTCTGGAAGATAGCTGCTGCTGCACAATTGGGCCATCAGGCAGCTTTTACTTGTACGTCAAGATTTGAAAAACTAAACAAACAATTAGAGACAAAGGTTTTGTCTCACAAGATAGCAAAGGCTGTCATGCAGTTTTGGCATTCAGCCGAGCTTCTTCTAGAAAATGATCTTCACATTAACTGCATTTTGGGTTGTGTTAAATCTGAAAATGTCGATGCAAATGAACCTATCAGAGACCAGAGAAGAACCTACAATATGCTGCTGCCGGTTATTTTCTCTGTCCTTCTCATTCTGTCTACAAAAGAAACAGTGCTATTTGAATTTGGTCTTTGTATTGCTAGATTTTTGCTGCTGTATGAATTTTCTTTTTCTAATTTATTGAGGCTGGTTAAGGGTGCTAAAATTCCCAATGAAGCCTTTGTTGTAAACTGGTTGTATGGATTGGTTGAAGAGTTTGAATCACAAGAGAATGCATATGATGAGGAAGAAGGAGAAAATAGCACTTATTACTTGCCCAGTGTCTATGAGGGCAATAAATCATCGAAATCGGCACAGAAGAAACATAAAATTTTGAAGTCTTATACTCCTAGGTGTAGTGATGCTGGTGCTGATTTGCCTTATGTACACTATACAACTGGAACTCAACCATCCATGATGTTTGGAAAAAGACCTGCTAGTTTAAATGTTGGGTCAATACCAACAAAGCGCATGCGTACAGCTACTAGGCATAGAGTTGTAAGCCCTTTCACTAACATTGGGACAGCACAAGCTCAAGCTAAGGCGGATGCTTCAAGTGGTGATACCAATTCCTTTCATGATGACCAGAGTACTTTACATGTCGGACCCCTGATCCAGAAAGGGACTGAGGTGGAGTCAGTTGCAGATTTTGAAAAACAGCTATCTTATGATTCTGCAGAAACATTTCTTAAAACGAAGAAGAAAAAGGCAAAGACTTTGGGTTCGATGTATGATCAGGGGTGGCAGTTGGATTATGTTGTCCTAAATGAACAGAGGGATCAGTCCAAGAAGAGAGGGGATAGTCATCACTTTGAATCTATTGGAAGTGGTGGTAAAGCTACTTGTTTATATGGGCAACATAATGGGAAGAAACCAAAGGTAATGAGGCCACTCGATAGTCCTTTGGACAATATCGTGCCACTGAGTAATTCTATTCCTTCCCCTGCTGCTTCACAAATGAGTAACATGTCATCTCCTAATAAATTTATCAAGATCATTAGTGGTCGAGACAGGGGCCGGAAAGCTAAATCTCTGAAGACTTCTGCGGGACAGCCTGGTTCTGGAAGTCCTTGGTCACTATTTGAAGATCAGGCCCTTGTGGTCCTGGTGCATGATATGGGTCCAAACTGGGAGCTCGTGAGTGATGCTATCAATAGTGCTCTCCAAATAAAGTGTGTCTTTCGCAAACCCAAAGAGTGCAAGGATCGTCATAAAATTTTAATGGATAGAACTACTGGGGATGGTGCAGACAGTGCTGAAGATTCAGGGTCTTCACAATCTTATCCGTCTACGTTACCCGGAATTCCTAAGGCATGGAATTGTTTTCATTTTCATGGTAGTGCCAGGCAGCTATTTCAACGGTTACAGGGGCCAATGGAGGAGGATACATTGAAGTCTCATTTTGAGAAAATTATAAAGATTGGGCAGAAGCAACATTACCTTAAGAATCAGATTGATAACCAGGATTCAAAACAAGTAGTGGCTGCCCATAATTCACATGTGATTGCTCTTTCCCTAACGAGTCCCAACAACCTGAATGGAAATCTTTTAACGCCACTTGATCTCTGTGAAGCTGAAGAAACAAACCCAGATGTCCCAGCCGTAGGGTACCAAGGTTCTCATCCTGGTGGTTTGACATTACCTCATCAAGGTTCTATACAGTCAACGCATCCCACATCTGGGGTGAACTCTTCCCTACCTGGGTCTTCTGGTATGGCTCTCGGCCATAACTTGTCATCATCATCTGGTTCGGCCATAACATCTGTCAGGGGTGGTAGATATGGAATTCCAAGGAATTCTCCTACATCAATGGATGAGCAACAGAGAGTACAATACAATCAAATGTTACCTGGAAGAAACATTCAGCAGAGCATTTCAGTTACTGGGACTCTTTCTGGAAGTGATCATGGTCGCATGCTTCCGGGCGGAAATGGTATTGGCATAATGGGTGGAATTAACAAAGCCATGGCAATGTCTAGGCCAGGGTTTCAAGGATTAGCATCACCATCGATGCTTAATTCTGGAAGCATGATTTCCTCTAGTATGGTTGGGATGCCAAGCCCTGTAAATATGCACTCTGGAGTTGGCCCAGGACCAGGCAACTCAATTTTAAGACCTCATGAGACACTACATATGATGAGGCCTGGCCATAACCCAGAACATCAAAGACAAATGATGGTTCCAGAGCTTCAGATGCAAGTCACCCAAGGGACCAGTCAAGGTATTCCTGCTCTATGCGGGCTGAGTTCTTCGTTTAGCAATCAGACAACACCAGCTGTTCAGCCTTATCCAGGACATGCACAACAGTCACACCAACTCTCGCAGCAGCAGTCCCATCTCAGTAATCCTCGTCCCCATCTTCAAGGTCCGAGTCATACTAATTCACAGCAGCAAACCTATGCGGTCCGGTTAGCGAAGGAAAGGCAAATGCAGCAACGATATCTCCAGCAGCAGCTTGCTGCATCCAATGCATTGTTGCCACATGTCCAGGCAAAGTCTCAACTTTCCATATCATCAACACCATTGCAGAACAATTCTCAGGTTCAACCACAAAATTCTTCTCAGCAAGTCCCACATTCACCTATAACGCCATCATCCCCTTTGACTATGTCATCCCAGCTCCAACAACAGAAACTTCACCAGTCACAACCTGGCTTCAGCAGAAATCCCCCCGCTAGTGGGTTGACTAACCAAGCAGCAAAGCAACGTCCACGACATCCACCACAGCAGCCACCACCACAACAGCAGTATCAACAATCTGGTAGGCAGCATCCTAATCAACGGCATAATGTACAGTCTCAACAGCAGGCAAAACTTATGAAGGGAATGGGAAGAGGAAGTATGTTGGTCCATCCGAACCTCTCTGTGGATGCTTCTCATCTAAGTGGACTCTCTCTGCCTGTGGGAAGTCAAACTGGTGAAAAAGGGGACCAAATCTTGCACATGATGCAAGGTCAAAATATATATCCAGGATCTGGTTTAAACCCAAATCAGCCATCGAAGCCTTTGGGTCATACTCATTCTTCAAATCATTCACAGTTGCAGCAGAAGCTGCATTCTGGGTCACCAACCACTTCATCGAAGCAACTTCATATTTCTTCTGATACTAAAGCTCAAGCACAGGTTTCATCAGTTTCATCAGGCCAGTTGTTGTCATCTCCACCACCAGCTGTTATTGCTTCTAACCAACATCAGCTGCAGCCACAGAGTCAGTCTAAGAAAATTAATCATACTCAAACCAACGTTCAGAGAATCTTGCCACTAAACCATCCCGTTCATTCTGAGTCATTAAAGTCTGATCCAATTCAAGCTGATCAGCAGCCTGCAAACAGTTTTTGCAAGGTTAGCGCATGTGCTACAGTGGCACAGAGTTGTATGGATCCTGTTAGTGCTGTACCAGTTATTGCCACTGTATCTTCTCAGTGGAAAGCAGCTGAACCACCATTTGATTCAACTGTGAACAATCAAACCACTCAAATGAGCTCCTTGGGAAGTGCACCTGCTGGAAATTCCACTGGAAATGAGCAACCGACAATTAGTCAAGGGTTGGAGCCAAGATCTGCTAGCTTGACTTGTCATGCACATAATTCTGATACACAGTGGCAAAAACGTCAGGTACAACCTCTCCAACAGTCATCACAACCCATCCTATCTCAGCAGCCATATCAGACTGAGCAGCAGCAACAGCATGAGAAAGAAGAATATTCTCCTAAAGATATTGTTTTACAACCTCAACAACATATGCCGCATCTACAATCAGGGCAGAACAATGAAGCTGATTATTCATGGGGACTGTGGAATATGGAAACAGATATTCGTTGTTTCTGCATATGTCCTGTTGATGTACTAACCAAAGTTGCATTGGCAGGCATCATGGCTAATCATGTTCTTGTTTGGCAAATCTTGTATATTAATAGTGTTCTTAGAAGGTTGACCCCCCATTTTGGTTTTTGGAAAAGAGACGAGTATAGAGGTCTTTTTGTATAG 6006 0.4272 MNGYKSGSALLVNAEVDSMGGVVDGGIGIGLKISPRRAAIEKAQAELREEYDAREERRRELEFLEKGGNPLDFKSGNAASVSVQSTSITDQPHEQFVTSEAKGSFALTASPHADSVDSSARPGAPLASEPNTADNLQLFDGENELPDTEKRCLNRRNNIAVSEQSSQIDGSQNAKETEDSAIFGPYARRNRSRPIHGPRGPSREAKGLLLETDNQKNPNLPTISKPEPSSLNCGIGTKSLTTNNTLNDEFLGIRDHQSTIGSASVPKDKLDITVNINLKENRETLPSEDNTVQNPILMATGEANVVELSKPIGVANSDSPSHRPTTKAENGPYDCQPNGFGNVEVDRKSVTNEGQNNIARLGKKSFGLGSSCSQTSFGRHVNNDSDMCTNTKSVDANENTMEQTFTLENKLKSANCEFVKDRHKTKNGAIVSNEHDADCPDHSGSDNIIKAEEDFHINSSSMSNIKGVHNDSTTPKADKDTVLVDQSNSVKESSSERHQVPVDVSLSESPQTVLAEKVKSATSDDQPCAMHNMKLVDKAREDSILEEAQIIEAKRKRIAELSLRSLPTQNHRKSHWGFVLEEMAWLANDFAQERLWKIAAAAQLGHQAAFTCTSRFEKLNKQLETKVLSHKIAKAVMQFWHSAELLLENDLHINCILGCVKSENVDANEPIRDQRRTYNMLLPVIFSVLLILSTKETVLFEFGLCIARFLLLYEFSFSNLLRLVKGAKIPNEAFVVNWLYGLVEEFESQENAYDEEEGENSTYYLPSVYEGNKSSKSAQKKHKILKSYTPRCSDAGADLPYVHYTTGTQPSMMFGKRPASLNVGSIPTKRMRTATRHRVVSPFTNIGTAQAQAKADASSGDTNSFHDDQSTLHVGPLIQKGTEVESVADFEKQLSYDSAETFLKTKKKKAKTLGSMYDQGWQLDYVVLNEQRDQSKKRGDSHHFESIGSGGKATCLYGQHNGKKPKVMRPLDSPLDNIVPLSNSIPSPAASQMSNMSSPNKFIKIISGRDRGRKAKSLKTSAGQPGSGSPWSLFEDQALVVLVHDMGPNWELVSDAINSALQIKCVFRKPKECKDRHKILMDRTTGDGADSAEDSGSSQSYPSTLPGIPKAWNCFHFHGSARQLFQRLQGPMEEDTLKSHFEKIIKIGQKQHYLKNQIDNQDSKQVVAAHNSHVIALSLTSPNNLNGNLLTPLDLCEAEETNPDVPAVGYQGSHPGGLTLPHQGSIQSTHPTSGVNSSLPGSSGMALGHNLSSSSGSAITSVRGGRYGIPRNSPTSMDEQQRVQYNQMLPGRNIQQSISVTGTLSGSDHGRMLPGGNGIGIMGGINKAMAMSRPGFQGLASPSMLNSGSMISSSMVGMPSPVNMHSGVGPGPGNSILRPHETLHMMRPGHNPEHQRQMMVPELQMQVTQGTSQGIPALCGLSSSFSNQTTPAVQPYPGHAQQSHQLSQQQSHLSNPRPHLQGPSHTNSQQQTYAVRLAKERQMQQRYLQQQLAASNALLPHVQAKSQLSISSTPLQNNSQVQPQNSSQQVPHSPITPSSPLTMSSQLQQQKLHQSQPGFSRNPPASGLTNQAAKQRPRHPPQQPPPQQQYQQSGRQHPNQRHNVQSQQQAKLMKGMGRGSMLVHPNLSVDASHLSGLSLPVGSQTGEKGDQILHMMQGQNIYPGSGLNPNQPSKPLGHTHSSNHSQLQQKLHSGSPTTSSKQLHISSDTKAQAQVSSVSSGQLLSSPPPAVIASNQHQLQPQSQSKKINHTQTNVQRILPLNHPVHSESLKSDPIQADQQPANSFCKVSACATVAQSCMDPVSAVPVIATVSSQWKAAEPPFDSTVNNQTTQMSSLGSAPAGNSTGNEQPTISQGLEPRSASLTCHAHNSDTQWQKRQVQPLQQSSQPILSQQPYQTEQQQQHEKEEYSPKDIVLQPQQHMPHLQSGQNNEADYSWGLWNMETDIRCFCICPVDVLTKVALAGIMANHVLVWQILYINSVLRRLTPHFGFWKRDEYRGLFV 2001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01321 2001 SMART bromneu2 564 629 IPR014012 -
Vimu9g01321 2001 MobiDBLite consensus disorder prediction 110 139 - -
Vimu9g01321 2001 MobiDBLite consensus disorder prediction 1429 1470 - -
Vimu9g01321 2001 MobiDBLite consensus disorder prediction 162 178 - -
Vimu9g01321 2001 MobiDBLite consensus disorder prediction 1869 1899 - -
Vimu9g01321 2001 MobiDBLite consensus disorder prediction 1218 1261 - -
Vimu9g01321 2001 MobiDBLite consensus disorder prediction 1869 1908 - -
Vimu9g01321 2001 ProSiteProfiles Myb-like domain profile. 1029 1081 IPR001005 -
Vimu9g01321 2001 MobiDBLite consensus disorder prediction 162 233 - -
Vimu9g01321 2001 MobiDBLite consensus disorder prediction 212 233 - -
Vimu9g01321 2001 CDD SANT 1030 1076 IPR001005 -
Vimu9g01321 2001 ProSiteProfiles HSA domain profile. 563 638 IPR014012 -
Vimu9g01321 2001 Pfam HSA domain 569 606 IPR014012 -
Vimu9g01321 2001 MobiDBLite consensus disorder prediction 1661 1730 - -
Vimu9g01321 2001 MobiDBLite consensus disorder prediction 1514 1613 - -
Vimu9g01321 2001 PANTHER CHROMATIN MODIFICATION-RELATED PROTEIN EAF1 A-RELATED 4 667 IPR044798 GO:0035267
Vimu9g01321 2001 MobiDBLite consensus disorder prediction 1819 1855 - -
Vimu9g01321 2001 MobiDBLite consensus disorder prediction 1588 1613 - -
Vimu9g01321 2001 MobiDBLite consensus disorder prediction 1659 1730 - -
Vimu9g01321 2001 FunFam Helicase/SANT-associated, DNA binding protein 1024 1086 - -
Vimu9g01321 2001 MobiDBLite consensus disorder prediction 1514 1577 - -
Vimu9g01321 2001 SMART sant 1027 1083 IPR001005 -
Vimu9g01321 2001 Pfam Myb-like DNA-binding domain 1031 1079 - -
Vimu9g01321 2001 Coils Coil 37 60 - -
Vimu9g01321 2001 MobiDBLite consensus disorder prediction 313 337 - -
Vimu9g01321 2001 MobiDBLite consensus disorder prediction 1207 1278 - -
Vimu9g01321 2001 MobiDBLite consensus disorder prediction 460 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01321 Vimu-Chr9 21369947 21397714 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01321 - - gmx:100811365 2712.95