Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vimu9g01315 | ATGCTTATAGTTGGTACACGAGGAGATGTGCAACCATTTATTGCAATAGGCAAACGATTGCAGGACTATGGCCATCGAGTTAGATTAGCAACCCATTCAAATTTTAAGGAGTTTGTTTTGACAGCGGGGTTGGAGTTTTATCCATTAGGCGGTGATCCTAAAGTTCTGGCTGGTTATATGGTTAAAAATAAGGGCTTTCTGCCATCAGGACCTTCTGAGATACCTATTCAGCGAAATCAAATGAAAGAAATTATTAACTCTCTGCTTCCTGCTTGTAAAGAACCAGATATTGATTCTGGTGTGCCCTTTAAAGCAGATGCAATCATTGCCAATCCCCCTGCCTATGGGCATACCCATGTGGCAGAGGCACTTAAAATTCCAATTCATATTTTTTTCACGATGCCATGGACGCCAACTACTGAATTTCCACATCCTCTGTCACGTGTAAAGCAACAGGCTGGTTATAGGCTTTCATATCAAATAGTTGACTCTTTAATTTGGCTTGGAATACGGGACATGATTAATGATCTTAGGAAGAAAAAGTTGAAGCTACGACCAGGCTCTGAGACTGAGATTCCACATGCATACATATGGAGTCCACATCTTGTTCCTAAACCAAAAGGTGGTTGCTCTAGATCTCAGTCTTCACATTTTGTTTCTGTAGTCATTTTTGTTCTCTGTGCATCTGTTCGTTGTTATTATGATTTTCTTTCTGACTACTATGAGAAATGCTGCGAGAAAAATTAG | 747 | 0.4003 | MLIVGTRGDVQPFIAIGKRLQDYGHRVRLATHSNFKEFVLTAGLEFYPLGGDPKVLAGYMVKNKGFLPSGPSEIPIQRNQMKEIINSLLPACKEPDIDSGVPFKADAIIANPPAYGHTHVAEALKIPIHIFFTMPWTPTTEFPHPLSRVKQQAGYRLSYQIVDSLIWLGIRDMINDLRKKKLKLRPGSETEIPHAYIWSPHLVPKPKGGCSRSQSSHFVSVVIFVLCASVRCYYDFLSDYYEKCCEKN | 248 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vimu9g01315 | 248 | Gene3D | Glycogen Phosphorylase B; | 1 | 221 | - | - | |
| Vimu9g01315 | 248 | Pfam | Glycosyltransferase family 28 N-terminal domain | 1 | 142 | IPR004276 | GO:0005975|GO:0016758|GO:0030259 | |
| Vimu9g01315 | 248 | PANTHER | STEROL 3-BETA-GLUCOSYLTRANSFERASE | 1 | 207 | - | - | |
| Vimu9g01315 | 248 | SUPERFAMILY | UDP-Glycosyltransferase/glycogen phosphorylase | 2 | 206 | - | - | |
| Vimu9g01315 | 248 | CDD | GT1_Gtf-like | 1 | 206 | IPR002213 | GO:0008194 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vimu9g01315 | Vimu-Chr9 | 21304539 | 21317317 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Vimu9g01315 | 1 | 240 | Glycosyltransferase | AT3G07020 | 79.839 | 1.04e-137 | 396 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vimu9g01315 | K05841 | - | gmx:100780970 | 420.624 |