Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01314 ATGAAACGAAACCATAATTCCCACAACCACCACCACTACTTCCGACCACGCAAATGGATGACGATGATCATCGCCATTGTAACAATATGCATTATCATCCTGCTTCTTACCCTCACCAAACCTTCTTCTTCTTCATCAACATCTTCTTCCTCTTCTGCAACATGGTCTTCTTCTTCCTCTTCGTTCAATTTAACGGAAGAAGTAGGAGTGGGTCTTCCGAGATTGGCGTACATGTTGACGGGCACTAAGGGGGAGGAAGCGCAACTGAAGAGGCTTCTTCAGGCAGTGTATCATCCCAGGAACTTCTACCTGCTTCATCTCGATCTAGAAGCCTCCGATGAGGAAAGGCTCGAGCTTGCCAAGTACGTCAAGTTTGAGACTGTGTTTGCGGCGTTTGGGAACGTCATGGTCGTAGGTAAGTCTGATTTGGTCACCTACAAGGGCCCCACTATGGTTGCTTCCACTCTTCACGGCATTGCTCTGTTGCTCAAGAGGATTCCCCATTGGGACTGGTTTCTCAATCTCAGTGCCTCTGATTATCCTCTCATCTCCCAAGATGGTCTGTTGTCACTCTTCTTTGCTCTTTAA 588 0.4745 MKRNHNSHNHHHYFRPRKWMTMIIAIVTICIIILLLTLTKPSSSSSTSSSSSATWSSSSSSFNLTEEVGVGLPRLAYMLTGTKGEEAQLKRLLQAVYHPRNFYLLHLDLEASDEERLELAKYVKFETVFAAFGNVMVVGKSDLVTYKGPTMVASTLHGIALLLKRIPHWDWFLNLSASDYPLISQDGLLSLFFAL 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01314 195 PANTHER GLYCOSYLTRANSFERASE 17 192 IPR044610 GO:0015020
Vimu9g01314 195 Pfam Core-2/I-Branching enzyme 75 193 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01314 Vimu-Chr9 21298779 21299366 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01314 63 195 Glycosyltransferase AT1G03520 57.895 9.49e-50 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01314 K20891 - gmx:100813028 230.335