Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01290 TTGAGAAAAAAAATGGCTAAGTTAATTCAATTCTTTGAGTTGAACACAGGGGCCAAGATTCCTTCTGTTGGGTTAGGCACATGGCAAGCTGAACCAGGAATTGTAGCAAAAACTCTCACCACAGCCATTGAGTGTCGGGTCACCGTTGTTCAGGTTGGATACAGGCACATTGACTGTGCTCAAGTTTATGACAATCAAGCAGAGATAGGTTCTGCACTTAAGAAGATTTTTGATGATGGTGTGGTGAAGCGTGAGGACTTATGGATAACTTCCAAACTCTGGTGTAATGATCATGCTCCAGAAGATGTACCAAAAGCTTTCGATAGAACATTACACGATTTGCAACTTGACTACGTTGATCTCTATCTGATCCACTGGCCAGTCCGCACGAAAAGTGGAGCAGTTGGATTCAAGAGAGAATATCTAGAACAAACAGACATTCCTGGCACATGGAGAGCAATGGAGGCACTCTATGACTCTGGCAAGGCTAGAGCCATAGGAGTGAGTAATTTCTCTTCAAAGAAGCTTCAAGATTTGTTGGATGTAGCAAGAGTGCCTCCTTCTGTTAACCAAGTGGAATTGCACCCAGGATGGCAGCAGCCACAGTTGCATGCATTTTGTGAATCCAAAGGAATACATATATCTGGATACTCTCCACTAGGCTCACCAGGGAATCTGAAAAGTGACATTCTTAAGAATCCTGTTGTTGTAGAGACTGCAGAGAAACTGGGGAAGACACCAGCTCAAGTGGCCCTTCGGTGGGGATTGCAATCAGGTCATAGTGTGCTGCCAAAGAGTAATACTGAGTCCAGGATCAAGGAAAACTTTGATGTCTTTGACTGGTCTATTCCCGAAGAATTAATGGCCAAGTTCTCTGAAATTAAGCAGGCAAGTTTTCAAATACTTTTTCTAGCTTTAAAGACGAGTGGCTAA 933 0.433 MRKKMAKLIQFFELNTGAKIPSVGLGTWQAEPGIVAKTLTTAIECRVTVVQVGYRHIDCAQVYDNQAEIGSALKKIFDDGVVKREDLWITSKLWCNDHAPEDVPKAFDRTLHDLQLDYVDLYLIHWPVRTKSGAVGFKREYLEQTDIPGTWRAMEALYDSGKARAIGVSNFSSKKLQDLLDVARVPPSVNQVELHPGWQQPQLHAFCESKGIHISGYSPLGSPGNLKSDILKNPVVVETAEKLGKTPAQVALRWGLQSGHSVLPKSNTESRIKENFDVFDWSIPEELMAKFSEIKQASFQILFLALKTSG 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01290 310 FunFam NADPH-dependent aldo-keto reductase, chloroplastic 9 307 - -
Vimu9g01290 310 ProSitePatterns Aldo/keto reductase family putative active site signature. 263 278 IPR018170 GO:0016491
Vimu9g01290 310 CDD AKR_AKR4C1-15 10 299 IPR044498 GO:0016491
Vimu9g01290 310 Pfam Aldo/keto reductase family 23 294 IPR023210 -
Vimu9g01290 310 ProSitePatterns Aldo/keto reductase family signature 2. 154 171 IPR018170 GO:0016491
Vimu9g01290 310 PRINTS Aldo-keto reductase signature 109 127 IPR020471 GO:0016491
Vimu9g01290 310 PRINTS Aldo-keto reductase signature 230 254 IPR020471 GO:0016491
Vimu9g01290 310 PRINTS Aldo-keto reductase signature 154 171 IPR020471 GO:0016491
Vimu9g01290 310 PRINTS Aldo-keto reductase signature 49 73 IPR020471 GO:0016491
Vimu9g01290 310 PRINTS Aldo-keto reductase signature 188 217 IPR020471 GO:0016491
Vimu9g01290 310 SUPERFAMILY NAD(P)-linked oxidoreductase 10 294 IPR036812 -
Vimu9g01290 310 PIRSF AKR 5 307 IPR020471 GO:0016491
Vimu9g01290 310 PANTHER ALDO/KETO REDUCTASE 11 296 - -
Vimu9g01290 310 ProSitePatterns Aldo/keto reductase family signature 1. 53 70 IPR018170 GO:0016491
Vimu9g01290 310 Gene3D - 8 305 IPR036812 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01290 Vimu-Chr9 20973307 20975508 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01290 K00002 - gmx:100801791 516.924