Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01287 ATGGCTGCCTCAGTGCCAACCTTTGGAGCTGTTAACATGGCACCGTTGAAACTGAATGGCTCTAGCAGTGGAGTGACAGGCTCTGCATTCTTTGGAATCTGTTTGAAGAAAACCAGTTGTGTGAGATCTAGCCAGAAGAGTGTGTGTGGGAATTTCAAAGTTTCTGCAGAGATTGAATATGATGAGGAGAAGCAGACTTCAAAGGATAGATGGGGAGGACTTGCTTATGACACTTCCGATGACCAGCAGGATATCACTAGAGGGAAGGGAATGGTGGACACTCTCTTCCAAGCTCCCATGGAGAGTGGCACTCACTATGCTGTCATGAGTTCCTATGATTACATCAGTGCTGGTCTTCGCCAGTACAATTTGGACAACACCATGGATGGATTCTATATTGCTCCTGCATTTATGGATAAGATTGTTGTTCACATCACCAAGAACTTTTTGTCCTTGCCAAATATTAAGGTTCCTCTTATTTTGGGTATTTGGGGAGGCAAAGGTCAGGGGAAATCATTCCAATGTGAGCTTGTCTTTGCCAAGATGGGAATCAAACTAAGATGCATCCAAGATGAACTAAGAGTGTATTCAGCTATTCACCCCATAATGATGAGTGCTGGAGAATTGGAGAGTGGAAATGCTGGAGAGCCTGCTAAGTTGATCAGGCAAAGGTACCGTGAGGCAGCAGACATTATCAGAAAAGGAAAGATGTGCTGTCTCTTCATCAATGATCTTGATGCTGGAGCTGGTAGGCTTGGTGGAACAACTCAGTACACTGTGAACAACCAGATGGTGAATGCAACCCTCATGAACATTGCTGACAACCCAACCAATGTCCAACTTCCTGGCATGTACAACAAGGAGGAGAATCCCCGTGTTCCAATCATAGTCACTGGCAATGACTTCTCAACATTGTATGCTCCTCTCATTCGTGATGGTCGTATGGAAAAGTTCTATTGGGCACCTACTCGAGATGACAGGATTGGTGTCTGCCAAGGCATTTTCAGAACAGATGGTATCCCAAAGGAGGACATCATCAAGCTTGTTGACACTTTCCCTGGGCAATCTATTGACTTCTTTGGTGCCTTGAGGGCCAGAGTGTATGATGATGAAGTGAGAAAGTGGATTTCTGGGGTGGGAGTGGAGAATGTTGGGAAAAAGTTAGTGAATTCAAAGGAGGGACCACCAACTTTTAAGCAACCACAGATGTCTCTTAGCAAGCTCCTTGAGTATGGAAACATGCTTGTCCAAGAGCAAGAGAATGTGAAGAGAGTTCAACTGGCTGACAAATACCTCAAAGAGGCTGCACTTGGAGATGCAAATGAAGATGCCATGAAGACAGGAAACTTCTATGGACAAGCAGCTCAGCAAGTTCATGTTCCTGTTCCTGAAGGTTGCACTGATCCTGCTGCAGAAAACTATGATCCAACAGCCAGAAGTGATGATGGAAGCTGCACATATACACTTTAG 1470 0.4497 MAASVPTFGAVNMAPLKLNGSSSGVTGSAFFGICLKKTSCVRSSQKSVCGNFKVSAEIEYDEEKQTSKDRWGGLAYDTSDDQQDITRGKGMVDTLFQAPMESGTHYAVMSSYDYISAGLRQYNLDNTMDGFYIAPAFMDKIVVHITKNFLSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGIKLRCIQDELRVYSAIHPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCQGIFRTDGIPKEDIIKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVENVGKKLVNSKEGPPTFKQPQMSLSKLLEYGNMLVQEQENVKRVQLADKYLKEAALGDANEDAMKTGNFYGQAAQQVHVPVPEGCTDPAAENYDPTARSDDGSCTYTL 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01287 489 Gene3D - 123 322 IPR027417 -
Vimu9g01287 489 MobiDBLite consensus disorder prediction 466 489 - -
Vimu9g01287 489 PANTHER - 27 487 IPR044960 -
Vimu9g01287 489 FunFam Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic 123 322 - -
Vimu9g01287 489 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 128 347 IPR027417 -
Vimu9g01287 489 FunFam Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic 323 435 - -
Vimu9g01287 489 Gene3D - 323 435 - -
Vimu9g01287 489 Pfam ATPase family associated with various cellular activities (AAA) 163 319 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01287 Vimu-Chr9 20948813 20951699 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01287 - - gmx:100795298 885.945