Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01270 ATGGAATTTCACCAAAATGGCACCAAAACCAAACCCCCTGAAACACCGCTCGTCAACGGAACCGCGTTAACTCACCTCAACTCGCTCTTCCAAACTCACTTCTCCGCCAACATCGATCCTTCCAGAACTTTCGTCTCCAAGGTCAAGCGTCTCATTGTAAAGGTTGGGACAGCTGTTGTTACAAGAAGTGATGGAAGATTAGCACTGGGTAGAATTGGAGCTCTTTGTGAGCAGCTTAAAGAACTTAGCTCTCAAGGATTTGAAGTCATACTGGTAACTTCAGGTGCTGTTGGCCTTGGCAGGCAAAGACTAAGATATCGCAAATTGGCCAATAGCAGTTTTTCTGATCTTCAAAAGCCACAAGGTGAGCTTGATGGAAAAGCATGTGCTGCTGTTGGACAAAGTAGTCTCATGGCTCTCTATGATACCATGTTCAGCCAGCTTGATGTGACTTCTTCCCAACTTCTTGTGAATGATGGATTTTTTAGGGATGCTGGCTTCAGAAAACAACTTTCAGACACAGTGAACGCATTGTTAGATTTAAGGGTTATCCCCATTTTCAATGAAAATGATGCTGTTAGTACTAGGAAAGCACCATATGAGGATTCTTCTGGTATTTTCTGGGACAATGACAGTTTGGCTGGACTTTTAGCCTTAGAACTTAAAGCTGATCTCCTTGTTTTATTGAGTGATGTTGAGGGCCTTTACAGTGGTCCTCCAAGTGACCCAAACTCAAAGTTGATCCACACGTATGTAAAGGAGAAACATCAAGGGGAAATTACTTTTGGAGACAAGTCAAGATTGGGCAGAGGCGGTATGACTGCTAAAGTTAATGCTGCTGTTTGTGCTGCTCATGCTGGTACTGTCTTTCATAAAGATGCTCATTTATGGAGCAATATAAAGGAAGAGAGTGCACGTGAAATGGCAGTTTCAGCACGTGTGAGTTCTAGAAGACTTCAGATCCTCAAATCTGAAGAAAGGAGTAAAATATTATTGGCAATTGCTGATGCATTGGAGAAAAATGCAAGTGCAATAAGTCTTGAGAATGAAGCTGATGTTGCCGATGCTGTGACTGCTGGATATGAAAATTCGTTGATATCACGTTTAACCCTGAAGCATGAGAAGATCTCTAAGCTTGCAAAGTCTGTGCGAATGTTGGCAGCTATGGAAGAACCAATTGGTCAAATTTTAAAAAGAACAGAGATAGCAGATAAACTCATCCTGGAGAAAATTTCATGTCCATTGGGAGTCCTTCTGGTTATATTCGAGTCTCGACCTGATGCCCTTGTGCAGATAGCTGCATTGGCAATTAGAAGTGGGAATGGTTTACTGCTTAAAGGGGGAAAAGAAGCCCAACGATCAAATGCAATCTTACACAAGGTCATTACTTCGGTGATTCCAAATACTGTAGGTGACAAACTTATTGGGCTTGTGAATTCAAGAGATGAAATTCCATACCTACTTAAGCTTGATGATGTGATAGATCTTGTGGTCCCTAGAGGCAGTAATAAACTTGTTTCTCAAATCAAGGAGTCAACAAAAATTCCTGTTCTTGGACATGCTGGTAATGGAATCTGTCATGTATATGTCGACAAATCAGCTAATATTGATATGGCAAAACAGATTATTAGAGATGCAAAGACTGATTATCCTGCAGCCTGCAATGCAATGGAAACTCTTCTTGTACACAAGGATCTATCAAATAATGGTGGACTTAATGAGCTTGTCCTTGAACTCCAACGTGAAGGTGTTAAACTGTACGGTGGGCCAAGAGCTAGTGGCTTAATAAACATTGTTGGAACAAGCGATTTTCATCATGAGTATAGTTCACTTGCTTGCACAGTTGAAATTGTAGAAGATGTATTTGATGCCATTAACCACATACATGAACATGGAAGTGCTCATACTGAATGCATTGTTACAGAAGATTGTGAAGTTGCTGAGGCTTTCTTAAGTCAAGTTGACAGTGCTGCTGTTTTCCACAATGCAAGTACACGATTTTGTGATGGAGCACGCTTTGGCCTTGGTGCAGAGGTTGGAATTAGCACAAGTCGAATTCATGCACGAGGTCCTGTAGGAGTAGAGGGTTTGTTGACAAACAGATGGATATTGAGAGGAAGTGGGCATGTGGTTAATGGAGATCAAGGAATCAATTACACTTACAAGGAATTGCCACTAGAAGCATAA 2187 0.4138 MEFHQNGTKTKPPETPLVNGTALTHLNSLFQTHFSANIDPSRTFVSKVKRLIVKVGTAVVTRSDGRLALGRIGALCEQLKELSSQGFEVILVTSGAVGLGRQRLRYRKLANSSFSDLQKPQGELDGKACAAVGQSSLMALYDTMFSQLDVTSSQLLVNDGFFRDAGFRKQLSDTVNALLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSDPNSKLIHTYVKEKHQGEITFGDKSRLGRGGMTAKVNAAVCAAHAGTVFHKDAHLWSNIKEESAREMAVSARVSSRRLQILKSEERSKILLAIADALEKNASAISLENEADVADAVTAGYENSLISRLTLKHEKISKLAKSVRMLAAMEEPIGQILKRTEIADKLILEKISCPLGVLLVIFESRPDALVQIAALAIRSGNGLLLKGGKEAQRSNAILHKVITSVIPNTVGDKLIGLVNSRDEIPYLLKLDDVIDLVVPRGSNKLVSQIKESTKIPVLGHAGNGICHVYVDKSANIDMAKQIIRDAKTDYPAACNAMETLLVHKDLSNNGGLNELVLELQREGVKLYGGPRASGLINIVGTSDFHHEYSSLACTVEIVEDVFDAINHIHEHGSAHTECIVTEDCEVAEAFLSQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTNRWILRGSGHVVNGDQGINYTYKELPLEA 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01270 728 SUPERFAMILY Carbamate kinase-like 49 288 IPR036393 -
Vimu9g01270 728 CDD ALDH_F18-19_ProA-GPR 306 707 IPR000965 GO:0004350|GO:0006561
Vimu9g01270 728 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 315 709 IPR016162 GO:0016491
Vimu9g01270 728 Gene3D - 39 307 IPR036393 -
Vimu9g01270 728 PRINTS Glutamate 5-kinase family signature 130 158 IPR001057 GO:0005524|GO:0016301
Vimu9g01270 728 PRINTS Glutamate 5-kinase family signature 86 100 IPR001057 GO:0005524|GO:0016301
Vimu9g01270 728 PRINTS Glutamate 5-kinase family signature 209 236 IPR001057 GO:0005524|GO:0016301
Vimu9g01270 728 PRINTS Glutamate 5-kinase family signature 268 288 IPR001057 GO:0005524|GO:0016301
Vimu9g01270 728 PRINTS Glutamate 5-kinase family signature 170 191 IPR001057 GO:0005524|GO:0016301
Vimu9g01270 728 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 523 669 IPR016163 GO:0016620
Vimu9g01270 728 Pfam Amino acid kinase family 49 287 IPR001048 -
Vimu9g01270 728 Pfam Aldehyde dehydrogenase family 299 567 IPR015590 GO:0016491
Vimu9g01270 728 FunFam Delta-1-pyrroline-5-carboxylate synthase 38 311 - -
Vimu9g01270 728 ProSitePatterns Gamma-glutamyl phosphate reductase signature. 618 639 IPR020593 GO:0004350|GO:0006561
Vimu9g01270 728 SUPERFAMILY ALDH-like 303 710 IPR016161 GO:0016491
Vimu9g01270 728 PIRSF P5C_synthetase 284 728 IPR005766 GO:0003824|GO:0006561
Vimu9g01270 728 PIRSF P5C_synthetase 1 289 IPR005766 GO:0003824|GO:0006561
Vimu9g01270 728 Hamap Gamma-glutamyl phosphate reductase [proA]. 304 711 IPR000965 GO:0004350|GO:0006561
Vimu9g01270 728 PANTHER GLUTAMATE SEMIALDEHYDE DEHYDROGENASE 38 726 - -
Vimu9g01270 728 ProSitePatterns Glutamate 5-kinase signature. 266 283 IPR019797 GO:0004349|GO:0006561
Vimu9g01270 728 NCBIfam glutamate-5-semialdehyde dehydrogenase 312 700 IPR000965 GO:0004350|GO:0006561
Vimu9g01270 728 FunFam Delta-1-pyrroline-5-carboxylate synthase 523 669 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01270 Vimu-Chr9 20703028 20712420 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01270 K12657 - gmx:100797414 1223.76