Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01265 ATGGCCGCCGACAAAGGGAAGCCCTTCACCTTCTCGCTCCCTGTGAGCGTCGTCGTTTTGGCCATCGCATACATTTACGTCTCCACCGTCTTCGTCTTCATCGACCGCTGGCTCGGCCTCTTCTCCTCCCCGGGGATCATGAACGCCTTGGTCTTCACCGCGCTCTCCGCCGTCTGCAGTATCACCTACCGCGCCGCCATCACTACGGATCCGGGTCGCGTCCCCGCCACCTACATCCCCGACGTCGAAGACGCCGAGAGCCCCATCCATGAAATCAAACGCAAGGCCAAATTTCTTCCTCCCCGTTATGTATTTAATTTCCAAGAGGCTATATGCTTAAGCTATGTTTGGTACCCTATCTCCTCGGTTGTTGAATTTGTGAAGCGTGCATCCACATCTCATGTTGTAGCCACACCATTAATCTGCTTTTGGATCTGCAAGCAGGGCGGAGATTTGCGATATTGCCAAAAGTGTTCTCACTATAAGCCTCCTCGTGCACATCATTGCCGTGTTTGTAAAAGATGTGTTCTACGAATGGATCATCACTGCTTTTGGATAAATAACTGTGTGGGTCATGCAAACTATAAAGTCTTCTTCAATTTTGTCTTGTACTCAGTGATTTCGTGCATCTACTCCTTGGTCTTACTTGTGGGTAGTCTAGTTTATGATGGCATACAGGATGAAGAAAAAATTGGAAAAAGCTCTTTCCGTACTGTATATGTTGTTTCTGGGCTCTTGCTGGTCCCTTTATCCATAACATTATGTATCCTTTTTGGGTGGCATATCTATCTTGTCCTACATAACAAGACCACAATAGAGTATCATGAAGGAGTTAGGGCTTTATGGCTTGCAGAGAAAGGTGGGAGTATCTACAAACATCCATACGACCTTGGCCCATATGAGAATTTGACTTCTGTTTTGGGACCGAATATCCTTAGGTGGCTGTGGCCTTCTGCAAATCATATAGGTTCTGGACTTAGGTACAGCACCATCTATGATCTCCCAAAAGGTTCCACATCCAAATGA 1026 0.4688 MAADKGKPFTFSLPVSVVVLAIAYIYVSTVFVFIDRWLGLFSSPGIMNALVFTALSAVCSITYRAAITTDPGRVPATYIPDVEDAESPIHEIKRKAKFLPPRYVFNFQEAICLSYVWYPISSVVEFVKRASTSHVVATPLICFWICKQGGDLRYCQKCSHYKPPRAHHCRVCKRCVLRMDHHCFWINNCVGHANYKVFFNFVLYSVISCIYSLVLLVGSLVYDGIQDEEKIGKSSFRTVYVVSGLLLVPLSITLCILFGWHIYLVLHNKTTIEYHEGVRALWLAEKGGSIYKHPYDLGPYENLTSVLGPNILRWLWPSANHIGSGLRYSTIYDLPKGSTSK 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01265 341 ProSiteProfiles DHHC domain profile. 153 203 - -
Vimu9g01265 341 PANTHER PALMITOYLTRANSFERASE ZDHHC16 14 334 - -
Vimu9g01265 341 Pfam DHHC palmitoyltransferase 151 275 IPR001594 GO:0016409
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01265 Vimu-Chr9 20584394 20589451 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01265 152 317 Lipid Metabolism Gene Families AT4G22750 35.928 5.22e-26 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01265 K20029 - gmx:100798478 502.671