Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01253 ATGGCCACCGAAGATCTCCGATTCTTCGAGTTGAACACCGGAGCAAAGATACCTTCAGTTGGTTTGGGCACCTGGCTCGCTGAACCTGGCGTTGTTGCTCACGCTTTGACCACTGCAATAAACTGTATTGTGTATGGTTTTGGAGCAAAAATGGCTAACAGTGGCTCAACGCGGACCATGTCGATGCAGGTTGGGTACCGGCATATAGATTGCGCGCAATTTTATGGCAACGAGAAGGAGATTGGTGATGCCTTGAAGAAGTTGTTTGCTGATGGTGTAGTTAAGCGTGAAGATATGTTTATCACCTCCAAGCTATGGTGTAATGATCACTTGCCGGAAGACGTTCCAAAGGCTTTTGAAAGAACTTTACGTGAATTGAAACTGGACTATTTGGATCTCTACCTTATTCATTGGCCAGTGAGTGTAAAAGACGGAAAGCTTACCAAACCTGACATACCTAGCACTTGGAGAGCAATGGAGGCACTCTACAATTCTGGAAAGACTAGAGCTATAGGGGTCAGCAATTTCTCTGTAAAGAAGCTTCAGGATCTGTTGAACGTAGCAAATGTGCCTCCAGCCGTTAACCAAGTGGAATTGCATCCTTCATTACAGCAACCCAATTTGCATGCTTTCTGTGAATCCAAGGGAGTGCACTTATCTGTGAGTTTTGTGACCTACTTGTGTCGGCATAGTGGTGAGGGTTTTGGTAGTATACATGAGGTCATAGGTTTTAACCTGGGTTATTCACCTCTGGGAAAAGGATACAGTGAAAGTAATATACTTAAAAATCCAGTGCTGCTCACGACGGCAGAGAAGTTAGGGAAGACTCCAGCCCAAATAGCTCTAAGATGGGGACTACAAATGGGTCACAGTGTACTTCCTAAGAGTACAAATGATGCTAGGCTCAAGGAAAACTTTGATCTGTTTGATTGGTCTATACCTGCAGATTTGCTTGCCAACTTCTCTGACATCGAGCAGGAAAGAATAGTTACAGGAACTGGTTTTGTTAGCAAGACATCTCCTGGATACAAGACAACTGAAGAACTCTGGGATGGTGAGTAA 1062 0.4435 MATEDLRFFELNTGAKIPSVGLGTWLAEPGVVAHALTTAINCIVYGFGAKMANSGSTRTMSMQVGYRHIDCAQFYGNEKEIGDALKKLFADGVVKREDMFITSKLWCNDHLPEDVPKAFERTLRELKLDYLDLYLIHWPVSVKDGKLTKPDIPSTWRAMEALYNSGKTRAIGVSNFSVKKLQDLLNVANVPPAVNQVELHPSLQQPNLHAFCESKGVHLSVSFVTYLCRHSGEGFGSIHEVIGFNLGYSPLGKGYSESNILKNPVLLTTAEKLGKTPAQIALRWGLQMGHSVLPKSTNDARLKENFDLFDWSIPADLLANFSDIEQERIVTGTGFVSKTSPGYKTTEELWDGE 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01253 353 SUPERFAMILY NAD(P)-linked oxidoreductase 9 327 IPR036812 -
Vimu9g01253 353 ProSitePatterns Aldo/keto reductase family putative active site signature. 293 308 IPR018170 GO:0016491
Vimu9g01253 353 PIRSF AKR 238 349 IPR020471 GO:0016491
Vimu9g01253 353 PIRSF AKR 44 231 IPR020471 GO:0016491
Vimu9g01253 353 PIRSF AKR 2 48 IPR020471 GO:0016491
Vimu9g01253 353 PRINTS Aldo-keto reductase signature 61 85 IPR020471 GO:0016491
Vimu9g01253 353 PRINTS Aldo-keto reductase signature 121 139 IPR020471 GO:0016491
Vimu9g01253 353 PRINTS Aldo-keto reductase signature 193 222 IPR020471 GO:0016491
Vimu9g01253 353 PRINTS Aldo-keto reductase signature 159 176 IPR020471 GO:0016491
Vimu9g01253 353 PANTHER ALDO/KETO REDUCTASE 8 326 - -
Vimu9g01253 353 Pfam Aldo/keto reductase family 62 320 IPR023210 -
Vimu9g01253 353 ProSitePatterns Aldo/keto reductase family signature 1. 65 82 IPR018170 GO:0016491
Vimu9g01253 353 CDD AKR_AKR4C1-15 7 330 IPR044498 GO:0016491
Vimu9g01253 353 Gene3D - 6 353 IPR036812 -
Vimu9g01253 353 ProSitePatterns Aldo/keto reductase family signature 2. 159 176 IPR018170 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01253 Vimu-Chr9 20429684 20445574 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01253 K00002 - gmx:100809492 524.628