Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01235 ATGGTGCGGCAAGAAAACTCGTCTGCTTTTGTGAAGAAATATTTGTCAGTAAAAGCTCGAATTCGTTATCTAATCCTCCGCTATGAGGCCCTTACTTTCATTGCTGTATTGGTTGTAAGTTACACATTTATGGAGATCGCCGTGTTTGCAATAATGATGGATTATCTCACATATGCACTTGAAGTGCAGAATCAACGGATAGCTGCTATTGTCACAAATCTGCAAGATGCTTTATCATCTCTCTTTTTTGTTGTTGTTTCTCTGATCTCGCAAACATATACGGGCTCTTTCACTATGATCACATTTTGCGCTGCAGCTTCCATCGAGGGTTTAATGCTATTATGGACATCTACATCACCTGCACCTTCAGCGTTTGGTGCGGTATATGCCGCCATAGTCTTCCTTGGAATGGGAAAAAGTGGTCAAAAGCTTTCAGAAAGTTTCCTTGAGTATCAGTTGGAAGAGAAAATTAAACCAAAGAAACAAGGCGAAAAAGATGGAAGCACACAAGACAGAAATGAGAGAAGCCTCGCGCATACAATTTTTATTAGTATCTGGTTGTTCGTTCCACTGGTTGTTGGATATATCATAACAGTTTGTCTTGTTTTCATCTTCTATGATGCAACATTCGAGGACCTATTCAGATTTGCTGCACTTCTCATGGGAGCGACTCATCTCTTGTTCCTCATCGGTTCTTTGGGGTATAGCCGCCAAGAATTACCCGTTGAAAGCGATCTAGGCAAGATCCATAGAATCTTCAGCACAGCTTTTGAAAAACTGAGTTCAAAATATCCAACCTCACCGAATTCTTATTATTGGAAGGGTTACAAGCAGCAACACACGTATAATCGTGGTGAAGGAGTAAGGTTATTGCCACGAGTTCCTCGGTTATTCAGGTGGTTGGACAAAGCGGCCATTGTTAAAGCAGAAGATGAAGAAGAAGATTCAAGACATCATAGAGAGAGTCTTGAGACGCAAGAAAAGAGAAAGAAGATTTGCACTGTGAAGGACGTGAGAGATGTTAAAAGTCTTGTTCATATGATTTACCTTGGCCTTACCATCTTTCCTTATAGTTTACTCATTGCCTCTGGGAACACTTTCTTTGTTGCACAAGCAGGTGCGTTGGAACCAGTTATGAATAAAAGAGGTAACGATATCTCTATTCTATTCTTGATCAAATCCGTGGCGACGGACATGTCAAAGTTTACTTGTTTTCTCATCAGTCTTGCATTTCGAAACAAACAAAAACCAAGAGTTGCAAGTTTCATGTGGGAAAGAAAAGCAGCGACAATCATGAGGATTGGATTTGGTATTACGTGTGCTGTAATATGCGGCTTCATAGCATGGCAAGTGGAGATTCGCAGGTTGTCGTCAAAGTTGAATACAACAGTGGCCTTGGTTCCGCAATTTGTGTTACTAGGAGTGACAGAGGGACTTGTTGATGGGGGATTAAAGAGATTATTCGATGACCATGTAGCGAAATCGTTGTCGAATTTTGAGGATTCGTTTAGTGAGTTGGTGATTGGTGGTGGAAAACTTCTGATTATACCAAGTGTGTTGATTTTCAGCGGGTGGATCAAGGAAACAATCGACACTAGCCATTTGGACAGGTACTATCTGATGTTGGCGATAATGAACGCTGTGCTGCTTCTGGCTTTTGCATACTACTCCGTCACCTATGCGTACAAGGAAGTGTGTCCCGAAGATGAGAAGGTTTCCATACAGGAAAGATTGGATCATGCTCATCAACCAGACTCAGAAGACACCTATCAGGAAAATACTCCCCCATTTCCATAA 1797 0.4146 MVRQENSSAFVKKYLSVKARIRYLILRYEALTFIAVLVVSYTFMEIAVFAIMMDYLTYALEVQNQRIAAIVTNLQDALSSLFFVVVSLISQTYTGSFTMITFCAAASIEGLMLLWTSTSPAPSAFGAVYAAIVFLGMGKSGQKLSESFLEYQLEEKIKPKKQGEKDGSTQDRNERSLAHTIFISIWLFVPLVVGYIITVCLVFIFYDATFEDLFRFAALLMGATHLLFLIGSLGYSRQELPVESDLGKIHRIFSTAFEKLSSKYPTSPNSYYWKGYKQQHTYNRGEGVRLLPRVPRLFRWLDKAAIVKAEDEEEDSRHHRESLETQEKRKKICTVKDVRDVKSLVHMIYLGLTIFPYSLLIASGNTFFVAQAGALEPVMNKRGNDISILFLIKSVATDMSKFTCFLISLAFRNKQKPRVASFMWERKAATIMRIGFGITCAVICGFIAWQVEIRRLSSKLNTTVALVPQFVLLGVTEGLVDGGLKRLFDDHVAKSLSNFEDSFSELVIGGGKLLIIPSVLIFSGWIKETIDTSHLDRYYLMLAIMNAVLLLAFAYYSVTYAYKEVCPEDEKVSIQERLDHAHQPDSEDTYQENTPPFP 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01235 598 Coils Coil 306 329 - -
Vimu9g01235 598 MobiDBLite consensus disorder prediction 579 598 - -
Vimu9g01235 598 Pfam POT family 100 502 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vimu9g01235 598 Gene3D MFS general substrate transporter like domains 25 567 IPR036259 -
Vimu9g01235 598 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 41 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01235 Vimu-Chr9 20239182 20242950 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01235 32 577 Organic Solute Cotransporters AT2G38100 25.789 7.81e-25 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01235 K26562 - pvu:PHAVU_010G004400g 450.669