Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01234 ATGGCCAGGCAAGAAACGTCGTCTACTTTTGAGAAGAAAATGTTGTCATTAAAAGCTCTAATCCGCCGCTATGGGGCCCTAACTTTCATTGCAGAATTGCTTGTAAGTTACACATTTATGGAGATCGCAGTGTTGTCAGTAATGATGGATTATCTCACAGTGATACTTCGAATGCAGAATCAACGGATAGCTGCTATTGTCATAAATCTTGGAGATGCTTTATCATCTTTCTTTTTTGTTGTTGTTTCTCTAATCTCGCAAACATATACGGGTTCTTTCACTATGATCACATTTTGCGCTGCAGCTTCCATCGAGGGTTTAATGCTATTATGGATATCTACATTATTACCTACTCCTTCAGCGTTTGGTGCGGTTTATGCTGCCATAGTCTTCCTTTCAATTGGAAAAAGTGGTGTAAAGCTTTCAGAAAATTTCCTTGAGTATCAGTTGGAAGAGAAAATGAAACCAAAGAAACAAGGCGAACAAGATGGAAGCACACAAGACAGAAATGAGAGAGGCCTCGGGCATACAATTTTTATTAATAGCTGGTTGTTCGTTCCACTGGTTGTTGGATATATCATAACAGTTTGTCTTGTTTTCATCTTCTATGATGCAACATTCGAGGACCTATTCAGATTTGCTGCACTTCTCATGGGAGCGACTCATATGTTATTCCTCATCGCTTCTTTGGGGTATAGCCGCCAAGAATTACCCGTTGAAAGCGATCTAAGCAAGATCTATAGAATCTTCATCACAGCTTTACGGAAACTGCGTTTAAAATATCCAACCTCACCGAATTCTTATTACTGGAAGGACTACAAGCAGCAACACACGTATGATGGTGGTGAAGGCCGAAGGTTATTAGAACCACGAGTTCCATGGCTATTCAGGTGGTTGGACAAAGCGGCCGTAGTTAAACCAGAAGATATAAGACACCATAGAGAGAGTCTTGAGACACAAGAAAAGAAAAAGAAGATTTGCACTGTGAAGGACGTGAGAGATGTTAAAAGCCTTGTTCATATGATTTACCTTGGCCTTACCATCTTTCCTTATAGTTTACTCATTGCCTCTGGGAACACTTTCTTTGTTGCCCAAGCAAGTGAGTTGAAACCAGTTATGAATAAAAGAGGTAACGATATCTCTATTCTATTCTTGATCGAATCCGTGGCGACTGACATGTCAGAGTTTGCTTGTTTTCTCATCAGTCTTTCCTTTCGTAAAAAACAAAAATCAAGAGTTTCAAGTATAACGTTGGAAAGAAAAGCAGCGACAATCATGAGGATTGGAGTTGGAATTACGTGTGCTGTAATATGCGGCTTCATAGCATGGCAAGTGGAGATTCGCAGTGAGTTGATGGTTGGTGGTGGAAAACTTCTGATTATACCAATTGTGTGGGTTTTCAGCGGGTGGATCACGGAAACAATCGACACTAGCCATTTGGACAGGTACTATCTGATGTTGGGGATAATGAACGCTGTGCTGCTTCTAGCTTTTGCATACTTCTCCGTTACCTATGCATACAAGGAAGTGTGTCCTGAAGATGAGAAGGTAACCACAGAGGAAAGAGTGGATCATGCTCATCAACCAGACTCAGAAGACACCTCTCAGGAAAATACTCCCCCATTGAAAATGGGAAAGAGTAGATCATTACCATAA 1656 0.4082 MARQETSSTFEKKMLSLKALIRRYGALTFIAELLVSYTFMEIAVLSVMMDYLTVILRMQNQRIAAIVINLGDALSSFFFVVVSLISQTYTGSFTMITFCAAASIEGLMLLWISTLLPTPSAFGAVYAAIVFLSIGKSGVKLSENFLEYQLEEKMKPKKQGEQDGSTQDRNERGLGHTIFINSWLFVPLVVGYIITVCLVFIFYDATFEDLFRFAALLMGATHMLFLIASLGYSRQELPVESDLSKIYRIFITALRKLRLKYPTSPNSYYWKDYKQQHTYDGGEGRRLLEPRVPWLFRWLDKAAVVKPEDIRHHRESLETQEKKKKICTVKDVRDVKSLVHMIYLGLTIFPYSLLIASGNTFFVAQASELKPVMNKRGNDISILFLIESVATDMSEFACFLISLSFRKKQKSRVSSITLERKAATIMRIGVGITCAVICGFIAWQVEIRSELMVGGGKLLIIPIVWVFSGWITETIDTSHLDRYYLMLGIMNAVLLLAFAYFSVTYAYKEVCPEDEKVTTEERVDHAHQPDSEDTSQENTPPLKMGKSRSLP 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01234 551 MobiDBLite consensus disorder prediction 518 532 - -
Vimu9g01234 551 Gene3D MFS general substrate transporter like domains 11 512 IPR036259 -
Vimu9g01234 551 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 26 451 - -
Vimu9g01234 551 MobiDBLite consensus disorder prediction 518 551 - -
Vimu9g01234 551 Pfam POT family 95 452 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01234 Vimu-Chr9 20224559 20229359 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01234 33 448 Organic Solute Cotransporters AT4G21680 24.490 6.57e-15 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01234 K26562 - pvu:PHAVU_010G004400g 363.614