Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01226 ATGGTGTTGCAAGAAAATAACAGTTCAGAAAAAACCATCTGGCACATCACGATAGCTCGAGTCCGCTATCTATTCGTCAAGTTTAGTACCCTACCTTCCATTAGCGCTTTGCTTGTAGCCCACAAATTTGTGAACATCGCAGTGGTATCTATATTGATGGATTACTTCGACGATTCAATGGAGGAGGAGCATCAACGAATAGCAGCCATTGTTACAAATATTCAAGATGGTCTATCATCGCTCTTCGTAATTATTGTTTCTCTAATCTCAGAAGCATATACAGGTTATTACCCTGTGATAACGTTTTGCACTGCGGCTTTAATAGAGGGATTAATGCTACTATGGACGTCCGCATCATCAACCAAACCTTCCACATTTCATGCGATCTATGGAGCCATATTCTTCCTAGCATTAGGAACCAGTGGTCAAAAGCTTTTAGAAAAGTTTTTTGAATACCAATTGGAGGAGAAAATTAAAGCCAGAGATGGCAGTGAAGCAGTACGTAGTGGAAGCACAGAAAACAAAAAGGAACAAGATTTCATGAATAAAATGTTAATTAAAACTTGGTTGATCGGTCCAATTTTTGTTGGAAGTCTCGTGATAAGTCAATTTGCCTCCAACAATATAACGTACGAAGACTGGTTCCGATTCGCGGCTCTTCTCATGTGTGGGGCTTACATGTTGTTCCTCGCTGGTTCGGTGTGGTACAGTCGGGAAGAATTGCCCATCGAAAGCAATCTACACAAGATATACAGAATCTTCAAAGCAGCTTTAGGGAAACGACATGCAAAATATCCAACCTCCCTTAGTCGCTATTATTGGAAGGATAGTAAGCAAGATCGTTCTTGTGAACACCATGAAGGAGTAAGTTTACATCCACGAGGTCCAGGTCTGTTCAGGTGGTTGGACAAAGCAGCTATACTTGAAGCAGAAGATTCTAAAGTGAGTCCGGAGTTGCTAGAAAAGAATGAGAAACTTTGCACTGTAAAGGAAGTGAGCGATGTGAAGAGCCTTGTTCCTATGTTTTACCTGGGCTTTGCATTCTTTGGCTACAGTTTACTCCTAGCCACTGAGAGCACTTTCTTTGTTGCGCAAGCAAGCAACATGAGGTCAAATATTATACCCCATATCTCTTTTCTCGTTATGATCATGGAGCTCACGAGTGATACGTCACGAGTCATCTGCTTTCATACTGGTCGTCGATTCCGACACCTTAAAAAATTCAATTGCATCGATAATGTATGCAAAAAGAAAGCAGCAATTGTGAGGATTGGTTTTGGTATGGTTTGTGCAATAATTTGTAGCCTCATGGCATGGCAAGTTGAGGTTGGTAGATTGAAGGTAAGCACGCAGATGTTATATGAGGATGGTAGAAACTCCACAGTGGCGCTGGTTCCGCAGTTTTCAGTGTTGGGACTCACAAAGGGGCTTGTTGAAGATGGAATCGAGAGTTTGTTCCATGAGCATGTGGCGAAATCAATGTGGAGTTTTGATGGTGTATACATGGAATATGTGATTGGTGGTGGAAAAATCATGATCATACCACTTGTCTTGTGTATCCCTAATTGGTTCGGTGATACTTTGAACACAAGTCGTTTGGACAAGTTCTATCTTATGTTGGGGATATTGAACGCTGCGTTTCTTCTGCTTTTGTGGTACTACTCCTTCATGTTTGCGTACATAGAAGTACGTCCCGAAGATGATCCAGTAGTAGTTGAAGATGAAAATGTGGATTTCTTAAGAAAAGGGAAGAAGTGTGTTCTGTTGGGAGGTCGTGACCTCGAGAACGAAGAAGAGGGAGTCGGAGAAGGCGATGGCGTCGATTGGTCTCGTTGGCTGGAGGGGGATGCTGCATATTACTCCGGTGACGATGTGTAG 1878 0.4233 MVLQENNSSEKTIWHITIARVRYLFVKFSTLPSISALLVAHKFVNIAVVSILMDYFDDSMEEEHQRIAAIVTNIQDGLSSLFVIIVSLISEAYTGYYPVITFCTAALIEGLMLLWTSASSTKPSTFHAIYGAIFFLALGTSGQKLLEKFFEYQLEEKIKARDGSEAVRSGSTENKKEQDFMNKMLIKTWLIGPIFVGSLVISQFASNNITYEDWFRFAALLMCGAYMLFLAGSVWYSREELPIESNLHKIYRIFKAALGKRHAKYPTSLSRYYWKDSKQDRSCEHHEGVSLHPRGPGLFRWLDKAAILEAEDSKVSPELLEKNEKLCTVKEVSDVKSLVPMFYLGFAFFGYSLLLATESTFFVAQASNMRSNIIPHISFLVMIMELTSDTSRVICFHTGRRFRHLKKFNCIDNVCKKKAAIVRIGFGMVCAIICSLMAWQVEVGRLKVSTQMLYEDGRNSTVALVPQFSVLGLTKGLVEDGIESLFHEHVAKSMWSFDGVYMEYVIGGGKIMIIPLVLCIPNWFGDTLNTSRLDKFYLMLGILNAAFLLLLWYYSFMFAYIEVRPEDDPVVVEDENVDFLRKGKKCVLLGGRDLENEEEGVGEGDGVDWSRWLEGDAAYYSGDDV 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01226 625 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 39 554 - -
Vimu9g01226 625 Gene3D MFS general substrate transporter like domains 13 567 IPR036259 -
Vimu9g01226 625 Pfam POT family 164 497 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01226 Vimu-Chr9 20086448 20102858 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01226 64 565 Organic Solute Cotransporters AT3G53960 24.907 1.36e-27 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01226 K26562 - pvu:PHAVU_010G004400g 399.053