Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01223 ATGGCGCTGAAAGAAAACGGTCCAGAAATAAACTTCTCATTCGCTCTAATGAAGAATTTGTTGCATCAACTCCGTTATCTATTCTTCAACTCTAAGACCCTTCTACTCTGCATCGGCGGTAATCATTCGACTTTGTCTGCAAGCTACACCATTGTGGAATTCTCGGTGGTGTCTACTATGATGGATTACTGGAAAAATTCAGAGGTGGAGGAGGATCTACGAACAGCTGCTATCTTAACAAATCTACAAGATGGTCTATCGTCTGTCCTTTCCATTTTTGCTTCTTTAATCTCCGAATCATATACGGGTCCCCTGACTATGATCACAATTTGCGCTGCAGCTGCCATCGAGGGTTTAATGCTACTATGGACATCGGCTGATTCAGTGTCTGGTGCGCTATATGCAGCCATATTGTTTCTTGCATTAGGGAAAAGTGGCCAAACGCTTTTAGGAAGTTTTCTTAAAAATAAGGTGGAAGAGATACTTGAAGAAAGAGAACAAAGTGAAATAAAGAATGGAAGCACAGAAAAACAAAATGGGCAAGACCTCGTACGTACAATTCTTACAAATACGTGGTTGTTAGTTCCGTTGGTTGTTGGATACGTGGTAATAGTGTTTGCTGACTTTTCCAATCAAGATTACTATTATCTCTTCAGATCCTCTGCAATTCTCATGGGAGGGTGCTATCTTTTGTTCCTCTTTGGTAGGACGAAGTATAGTCACGAACAATTACTTGATGAAAGCAATCTAGGGAAGATCTTTAGAATCTGCAAAGCAGCTTGTGGAAGACGAAGATCAGATTATCCAACGTCTCCGAATTGCTATTACTGGAAGGGTAATGTGCGGACCAATTTATGTTATGACCACGATAAAGGACTGAGATTAAAGCCACGAGTTCCACGGCTATTCAGGTGGTTGGACAAAGCAGCTATACTCAATCAAAAAGATTCTATATATCCTGAGGTGAGTCTTGACACGGAAGAAAGGAATGGGAAGGTTTGCACAGTAGAGGACGTGAGGGAAGTGAAGAGCTTTGTTCCTATGATATACCTCTGCTTTACCTTCTTTGCTTACAGTTTACTCGTGGCTACTGGGAACACTTTTTTTGTTGCACAAGCAAGCAACATGAAACCTACCAAAGGTTATGATATCTCTAGACTCTTTTTGATCAAAACCGGCATGAGAAAAGTGTCGCAATTCATCTTCTTTTGGATCGTTACTGGCTTGCGTAGTATGAGAACTGCAGGCTTTTCGTCGAAAAGATTCACAGTAACGACTTCGATTATAAGCATTGGTTTTGGAATGGTGTGTGCCGTAATTTGTTGTGTCGTAGCGTGGAAAGTAGAGTTACAGAGATTGTCTTTGACAAAATATGGACAGGAAGAATTGAAAAGCCCAACCAGAGCCTTAGTTCCGCAGTTTATATTGTTGGGAATGACGGAGGCACTTGTTGAGGGGGGTTTAAAGCTTTTATATGTTGCCCACGTAGAAAAAGCACTGTGGAGTTTTACTGATTCGTATAGTGAATTACTGAATGGTATTGGCAAACTCCTCTTTTTTCCATTGGTCGTAACTTTCAGTGGCAGCTGGTTCAAGGAGAGTATCGATACTTCCCATGTAGACAGATTCTATCTGATGTTGGGAATATTGAACACTGTCCTGCTTCAAATTTTTGCGTACTACTCTTTCAAATACACATACAAGGAGATATGTCCCGACGACGACCATGTTGATCAAACATAG 1743 0.4102 MALKENGPEINFSFALMKNLLHQLRYLFFNSKTLLLCIGGNHSTLSASYTIVEFSVVSTMMDYWKNSEVEEDLRTAAILTNLQDGLSSVLSIFASLISESYTGPLTMITICAAAAIEGLMLLWTSADSVSGALYAAILFLALGKSGQTLLGSFLKNKVEEILEEREQSEIKNGSTEKQNGQDLVRTILTNTWLLVPLVVGYVVIVFADFSNQDYYYLFRSSAILMGGCYLLFLFGRTKYSHEQLLDESNLGKIFRICKAACGRRRSDYPTSPNCYYWKGNVRTNLCYDHDKGLRLKPRVPRLFRWLDKAAILNQKDSIYPEVSLDTEERNGKVCTVEDVREVKSFVPMIYLCFTFFAYSLLVATGNTFFVAQASNMKPTKGYDISRLFLIKTGMRKVSQFIFFWIVTGLRSMRTAGFSSKRFTVTTSIISIGFGMVCAVICCVVAWKVELQRLSLTKYGQEELKSPTRALVPQFILLGMTEALVEGGLKLLYVAHVEKALWSFTDSYSELLNGIGKLLFFPLVVTFSGSWFKESIDTSHVDRFYLMLGILNTVLLQIFAYYSFKYTYKEICPDDDHVDQT 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01223 580 Gene3D MFS general substrate transporter like domains 30 571 IPR036259 -
Vimu9g01223 580 Coils Coil 158 178 - -
Vimu9g01223 580 Pfam POT family 216 517 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vimu9g01223 580 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 60 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01223 Vimu-Chr9 20034875 20036773 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01223 45 579 Organic Solute Cotransporters AT2G38100 22.968 8.32e-22 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01223 K26562 - pvu:PHAVU_010G004400g 690.649