Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01222 TTGGTTGTAACCTACAAATATGTGGAAATCGCAGTGGTATCTATATTGATGGATTACTTCAACGATTCAACGAAGGAGAATCAACGAATAGCAGCCATTGTTACAAATATTCAAGATGGTCTATCATCGCTCTTCGTAGTTATTGTTTCTCTAATCTCAGAAGCATATACAGGTTATTACACTATGATAACGTTTTGCACTGCAGCTTCAATAGAGACATCTGCATCATCAACCAAACCTTCCACATTTCGTGCGGTCTATGGAGCCATATTCTTCCTAGCATTAGGAACCAGTGGTAAAAAACTTTTAGAAAAATTTTATGAATACCAATTGAAGGAGAAAATTAAAGACAGACATGCACGTAGTGGAAGCACAGAAAACAAAAAGGAGCAAGATTTCACGGATAAAGTGCTAATTAAAAGTTGGTTGTACGCTCCATTTGTTGTTGGATATGTCATTATAATTTGTTTTGCCTTCATCAGCATCGATACAACGTACGAGCACTGGTTCCGATTGGCGGCACTTCTCATGGGTGGGACTTACATGTTGTTCCTCGTTGGCTCGGTGGGGTACAGCCGCGAAGAATTGCCCATCGAAAGCAATCTACACAAGATATACAGAATCTTCAAAGCAGCATTAGGGAAACGACATGAAAAATATCCAACCTCGCCTAGTCGCTATTATTGGAAGGATAGTAAGCGAGATCGTTCTTGTGAATACCGTGAAGGAGTAAGGTTACTTCCACGAGTTCCACGTCTGTTCAGGTGGTTGGACAAAGCAGCTATACTTGAAGTAGAAGATTCCACAGCGAGTCTGGAGTTGCAAGAAAAGAATGAGAAGCTTTGCACTGTAAAGGAAGTGAGGGATGTGAAGAGCCTTGTTCCCATGTTTTACCTGTGCTTTGCATTCTTTGGCTACAGTTTACTACTAGCCACTGAGAGCACTTTCTTTGTTTCGCAAGCAAGCAACATGACGTCAAATATTACAACCAATGATAATGATATCTCTATTCTCATTTTGATCATGGAGGCATCGAGTGATGTGACACGATTCATCTGCTTTCTTATTGGTCGTGCATTCCGACACTTTAAAAAATTCAGTTGCATCGATAATGTTTGCAACAAGAAAGCAGCAATTGCGAGGATTGGTTTTGGTATGGTTTGTGCAATAATTTGTAGCCTCATGGCATGGCAAGTTGAGGTTGGTAGATTGAAGGTAAGCAAGCAGATGTTGTATGAGGATGGTAGAAACTCCACCGTGGCATTGGTTCCGCAATTTTCAACGTTGGGAATCTCAAAGGGGCTTGTTGAAGGTGGAATCGGGAGTTTGTTCCATGGGCACGTGGTGAAATCAATGTGGAGTTTTGATGATGCATACAAGGAATTGGTGATTGGTAGTGGAAAACTCATGATCATACCACTTGTCTTGTGTATCCCTAGTTGGTTCGGTGATACTTTGAACTCAAGTCGTTTGGACAAGTTCTATCTGATGTTGGGGATATTGAACGCTGCGTTTCTTCTGGTTTTTTGTTACTACTCCTTCAGATATGCGTACAAAGACGTACTTCCCCAAGATGATCCAGCAGTTGAAGATGAAAATGTGGATTTCATTTGCCAAAGTTCCGTTGGGATAGATCCAAAAACCATAATACTGACACAGACTAAGTATTAA 1671 0.4081 MVVTYKYVEIAVVSILMDYFNDSTKENQRIAAIVTNIQDGLSSLFVVIVSLISEAYTGYYTMITFCTAASIETSASSTKPSTFRAVYGAIFFLALGTSGKKLLEKFYEYQLKEKIKDRHARSGSTENKKEQDFTDKVLIKSWLYAPFVVGYVIIICFAFISIDTTYEHWFRLAALLMGGTYMLFLVGSVGYSREELPIESNLHKIYRIFKAALGKRHEKYPTSPSRYYWKDSKRDRSCEYREGVRLLPRVPRLFRWLDKAAILEVEDSTASLELQEKNEKLCTVKEVRDVKSLVPMFYLCFAFFGYSLLLATESTFFVSQASNMTSNITTNDNDISILILIMEASSDVTRFICFLIGRAFRHFKKFSCIDNVCNKKAAIARIGFGMVCAIICSLMAWQVEVGRLKVSKQMLYEDGRNSTVALVPQFSTLGISKGLVEGGIGSLFHGHVVKSMWSFDDAYKELVIGSGKLMIIPLVLCIPSWFGDTLNSSRLDKFYLMLGILNAAFLLVFCYYSFRYAYKDVLPQDDPAVEDENVDFICQSSVGIDPKTIILTQTKY 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01222 556 Pfam POT family 86 455 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vimu9g01222 556 Gene3D MFS general substrate transporter like domains 5 522 IPR036259 -
Vimu9g01222 556 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 10 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01222 Vimu-Chr9 20028004 20030187 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01222 16 523 Organic Solute Cotransporters AT3G53960 25.275 5.32e-31 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01222 K26562 - gmx:106798051 436.417