LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu9g01145	ATGCCCGGAGAACCACGCCCCTTGGAGATCCACCTCAGGGTCAATTCCAAGAGAAGCAACGCCAACATGGTTCACCCTGTCGCCGTCGAAACTGTGTACCCGGTTCAGCCCCAGAGACAGGAAGTCAAGCATTACCGCAAGTGGTTTCCTTGGTTGATACCTCTCTTTGTTGTTGCTAACATAGTTTTGTTTGTGATCACTATGTATGTCAACAACTGCCCCCATAACTCTGTCTCCTGCATTGCCACCTTCTTGGGTCGCTTCTCCTTCCAGCCCTTCAAAGAAAACCCCCTCTTGGGCCCTTCATCCTTGACACCTGAGTTATCCTTGTTGAGATATCAACAAGTTTTAATTGCTTTGGCTATTAGGTTACAGAAGATGGGGGCTCTTGATGTGAGCAGAGTGGTTCATAGACACCAGGGGTGGCGCCTTATCAGTTGTATGTGGCTGCATGGTGGGGTTTTCCATCTGTTGGCAAATATGTTGGGTATTCTAGTAATTGGAATTCGGCTTGAGCAAGAATTTGGGTTTGTGCTTATTGGACTGCTATTTGTCATATCTGGATTTGGGGGAAGTTTGCTTTCTGCCCTTTTCATCCAGTCAAACATTTCAGTGGGTGCTTCAGGTGCACTTTTCGGCTTGCTGGGGGGCATGCTTTCGGAACTCATTACTAACTGGACTATATATGAGAACAAGCTGGCAGCACTCCTCACCCTTGTGGTCATCATTGTTATCAATCTAGCAGTGGGAATTCTCCCACATGTGGACAACTTTGCTCATATTGGAGGCTTTCTTACAGGATTTCTTCTCGGATTTGTGTTTCTGATACGTCCCCAGTTTGGATGGGTTAACCAACGCTATGCTCCCCTAAATTATTCTCCAGAACGAGCTAAGCCTAAATTCAAAAAGTATCAGTGCATCTTATGGGTCCTCTCTCTCGTCATTCTAGTTGTTGGGCTTTCTGTTGGGCTTGTCGCGCTTCTCCGTGGTGTTGATGCAAATGACCACTGCTCCTGGTGCCATTATCTGTCTTGTGTTCCAACGTCAAAATGGAGCTGCCATACAGAGCCATCATATTGTGTGTCAAATCAGCTTGGTAACCAGCTGAATGTAACATGCTCAAGCAATGGTAAATCCAGTACATACTTCATGCAAGATCCAACCAGTTCCCAGATCCAGCAACTATGTACTCAACTTTGCAGTTGA	1206	0.4627	MPGEPRPLEIHLRVNSKRSNANMVHPVAVETVYPVQPQRQEVKHYRKWFPWLIPLFVVANIVLFVITMYVNNCPHNSVSCIATFLGRFSFQPFKENPLLGPSSLTPELSLLRYQQVLIALAIRLQKMGALDVSRVVHRHQGWRLISCMWLHGGVFHLLANMLGILVIGIRLEQEFGFVLIGLLFVISGFGGSLLSALFIQSNISVGASGALFGLLGGMLSELITNWTIYENKLAALLTLVVIIVINLAVGILPHVDNFAHIGGFLTGFLLGFVFLIRPQFGWVNQRYAPLNYSPERAKPKFKKYQCILWVLSLVILVVGLSVGLVALLRGVDANDHCSWCHYLSCVPTSKWSCHTEPSYCVSNQLGNQLNVTCSSNGKSSTYFMQDPTSSQIQQLCTQLCS	401

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu9g01145	401	Gene3D	-	108	277	IPR035952	-
	Vimu9g01145	401	PANTHER	RHOMBOID-RELATED	40	353	IPR002610	GO:0004252\|GO:0006508\|GO:0016020
	Vimu9g01145	401	Pfam	Rhomboid family	136	277	IPR022764	GO:0004252\|GO:0016020
	Vimu9g01145	401	SUPERFAMILY	Rhomboid-like	47	279	IPR035952	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu9g01145	Vimu-Chr9	19024793	19030082	Dispersed/Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu9g01145	-		-	gmx:100801675	640.573