Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01127 ATGCAGCAAAGGAAAAATGAAATAGAATATAAGCTTTCGAAATTGCAACAACCGATTCTGAAGAATCAGTTCAAAAGTGTTGAAGGAGTGTCTACGAATGAAGAAAACAACAAGAAATATATTCCCAAAGCAATCTCCAAAGAATCTTCTGGGTCTGAGGAATCCATTGCTTCTGAAACAAAAGACATTGTTGGCTCTGTCAAACGTTTCCTTGTTGCGTTATATTGGTTTGTCTATCCTTACACCATGTTTGGTCGAACATTAAGCACGATTTCTGCATCACTTCTAGCAGTGGAGAAACTATCAGATATATCATCTCCTTTATTTTTCATTGGTGTATTACAGGCTCTGCTACCTTTCACGTTGATGGACTTTTACGTTAATGGAGTGAATCAATTGTATGACTACGAAATTGACAAGATAAACAAACCATTTCTTCCATTGCCATCGGGGGCATTTTCCTTGACAACTGGTGTTGTTGTTACTGTGTCATCTGCAATCATGGGTTTCTTGGCTAGCTATATGATAGGTTCTTGGCCATTATTTTGGGGTCTTCTATCATTCTTTTTAATATGGAGTGGTTATTCAATTAAGGGTCCCTTCTTGAGATGGAAGAAAAATCCACTGCTTGCTGCAACTTGCATATATACCACTTTGGCTCTTGTATTTCCCATTTCGTTCTTCTATCACATGAAGACTTTTGTGTTGAAGAGAGCAGTTGCCTTTCCAAAGCCACTGATGTTCTTTGTTGCATTCACAAGCATATACTCATTGGGTATAGCACTATTCAAGGATATACCAGATATTGAAGGAGATAAAGCATTTGGCATCCAATCTTTTTCAACACGTTTAGGTCAAAAAAAGGTATTCTGGATCTGTGTTTCAATTTTGGAATCTGCATTTGGAGTTGCCATTCTGGCAGGACTATCATCTTCTCTCCTTTGGGTTAAACTTGTCACGGGTCTGGGAAATGCTGTTCTTGCTTCAATTCTCTGGAACAAAGCCAAATTTGTAGATTTGAGTGACAAAGCTTCCATTAGATCCTACTATATGCTGATTTGGAAGCTATTGTACGTGGCATACTTCCTCACGCCTTTAATTAGATAA 1107 0.3803 MQQRKNEIEYKLSKLQQPILKNQFKSVEGVSTNEENNKKYIPKAISKESSGSEESIASETKDIVGSVKRFLVALYWFVYPYTMFGRTLSTISASLLAVEKLSDISSPLFFIGVLQALLPFTLMDFYVNGVNQLYDYEIDKINKPFLPLPSGAFSLTTGVVVTVSSAIMGFLASYMIGSWPLFWGLLSFFLIWSGYSIKGPFLRWKKNPLLAATCIYTTLALVFPISFFYHMKTFVLKRAVAFPKPLMFFVAFTSIYSLGIALFKDIPDIEGDKAFGIQSFSTRLGQKKVFWICVSILESAFGVAILAGLSSSLLWVKLVTGLGNAVLASILWNKAKFVDLSDKASIRSYYMLIWKLLYVAYFLTPLIR 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01127 368 PANTHER HOMOGENTISATE SOLANESYLTRANSFERASE, CHLOROPLASTIC 23 367 - -
Vimu9g01127 368 CDD PT_UbiA_HPT1 74 365 IPR044502 GO:0004659
Vimu9g01127 368 Pfam UbiA prenyltransferase family 91 356 IPR000537 GO:0016020|GO:0016765
Vimu9g01127 368 Gene3D UbiA prenyltransferase 72 233 IPR044878 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01127 Vimu-Chr9 18678517 18681101 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01127 K09833 - gmx:100777408 449.129