Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01087 GTTTTACAAAAGGCTTTGGAAGTGTGGGACCTACAAGTTATCCCTCTTGACTCTCCAGTTGCTGAGCCTGCCCAGATTGACCCTGAGCTGGAAAATGCCTTCATTTGTCATCTACAAGACCATTGGTTTTGTATCCGCAAAGTGAATGGGGAGTGGTATAATTTTGACAGTCTCTATGCAGCCCCACAACACCTTTCCAAGTTTTACCTTTCTGCCTATCTTGACTCTCTGAAAGGCTTTGGGTGGAGCATATTCCTAGTCAGGGGAAATTTTCCAAAAGAATTCCCCATCTCCTCATCTGAAGCGTCTAATGGTTTTGGTCAGTGGCTTTCACCTGAAGATGCTGAGAGGATAACTAAATCTTGCAACTCAGTACAGGCTCCGCAACAGAGAGTTAATGAGAGCCAACAGCACTATGATCAGTTTCTTTCTCGCGGGGAAACTGAAATGTTATTAGACATGGAAGATGAGGAACTAAGGGCTGCAATTGCAGCAAGTCTGATGGATTCGTCCCCAATTGTGACCACTGCTGAAGCCAGTACTCCCCAAAATGATTATCAAAGTAGTAAACAGGTGGCCACTACTGAAACTACCCCTCTAAATGATCAAAATTCCGAACAAGCAGTAACTACTGAAGCTATCGCTCTAAATGGGCAACAATCCAAACTAGTGGACCCCATTGAACCTATTCTACCTCTCAATTCTCAGAATGATCAAAACAGCAAAGTGGCATCCACTATAGGCGATAACGTTCAAGATGAAAACGAGAATAAAGAGAAAGCTGTCTAA 789 0.4347 VLQKALEVWDLQVIPLDSPVAEPAQIDPELENAFICHLQDHWFCIRKVNGEWYNFDSLYAAPQHLSKFYLSAYLDSLKGFGWSIFLVRGNFPKEFPISSSEASNGFGQWLSPEDAERITKSCNSVQAPQQRVNESQQHYDQFLSRGETEMLLDMEDEELRAAIAASLMDSSPIVTTAEASTPQNDYQSSKQVATTETTPLNDQNSEQAVTTEAIALNGQQSKLVDPIEPILPLNSQNDQNSKVASTIGDNVQDENENKEKAV 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01087 262 Pfam Josephin 1 88 IPR006155 GO:0004843|GO:0016579
Vimu9g01087 262 PRINTS Josephin signature 49 69 - -
Vimu9g01087 262 PRINTS Josephin signature 73 92 - -
Vimu9g01087 262 PRINTS Josephin signature 28 47 - -
Vimu9g01087 262 MobiDBLite consensus disorder prediction 177 206 - -
Vimu9g01087 262 FunFam ataxin-3 homolog 1 92 - -
Vimu9g01087 262 PANTHER ATAXIN-3-RELATED 1 258 IPR033865 GO:0004843|GO:0016579
Vimu9g01087 262 MobiDBLite consensus disorder prediction 232 251 - -
Vimu9g01087 262 ProSiteProfiles Josephin domain profile. 1 102 IPR006155 GO:0004843|GO:0016579
Vimu9g01087 262 MobiDBLite consensus disorder prediction 227 262 - -
Vimu9g01087 262 Gene3D - 1 103 - -
Vimu9g01087 262 SMART Josephin_2 1 90 IPR006155 GO:0004843|GO:0016579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01087 K11863 - gmx:100776098 431.024