Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01084 ATGGTAGCAGATTCTAAGTCCAAATCCGACCTCTCTTTCGGCAAAACCTTTGCCAGCAGTGCTTTTTCTGCATGTTTCGCTGAGGTGTGTACTATTCCCTTGGACACTGCCAAAGTTAGGCTTCAGCTTCAAAAACAAGCTGCAGCGGGTGATGTAATCTCCTTACCTAAATATAAGGGTATGCTGGGAACAGTTGGTACCATTGCAAGGGAAGAAGGTCTTTCAGCACTCTGGAAGGGGATTGTGCCAGGGTTACATCGACAGTGTGTGTATGGAGGTTTAAGAATTGGGTTATATGAGCCTGTTAAGTCTTTGTATGTGGGGAAGGACCATGTTGGAGATGTTCCATTGTCAAAGAAAATTCTTGCTGGATTCACAACTGGTGCAGTGGCAATTGCAGTGGCAAATCCAACTGATCTTGTGAAAGTCAGACTTCAAGCAGAAGGAAAACTACCTCCTGGTGTTCCCAGGCGTTACTCTGGATCTTTAAATGCTTATTCAACAATTGTGAGACAGGAAGGAGTTGGGGCTCTTTGGACTGGTCTTGGTCCCAATATAGCAAGAAATGGTATCATCAATGCTGCGGAATTAGCCAGCTATGATCAAGTGAAACAGACTATTTTGAAAATTCCAGGATTCACTGATAATGTTGTAACTCATCTCCTTGCTGGTCTTGGGGCAGGGTTTTTTGCTGTCTGTATTGGCTCCCCAGTAGATGTGGTTAAGTCCAGAATGATGGGAGATTCTAGTTACAAGAACACCCTTGATTGTTTTATCAAAACATTAAAGAATGATGGACCAATGGCCTTTTACAAAGGTTTCCTTCCAAATTTTGGACGGCTAGGATCTTGGAATGTGATCATGTTTCTAACCTTAGAACAGACTAAAAATTTCGTCAAAAGCTTAGAGTCATCTTGA 918 0.4259 MVADSKSKSDLSFGKTFASSAFSACFAEVCTIPLDTAKVRLQLQKQAAAGDVISLPKYKGMLGTVGTIAREEGLSALWKGIVPGLHRQCVYGGLRIGLYEPVKSLYVGKDHVGDVPLSKKILAGFTTGAVAIAVANPTDLVKVRLQAEGKLPPGVPRRYSGSLNAYSTIVRQEGVGALWTGLGPNIARNGIINAAELASYDQVKQTILKIPGFTDNVVTHLLAGLGAGFFAVCIGSPVDVVKSRMMGDSSYKNTLDCFIKTLKNDGPMAFYKGFLPNFGRLGSWNVIMFLTLEQTKNFVKSLESS 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01084 305 Pfam Mitochondrial carrier protein 114 209 IPR018108 -
Vimu9g01084 305 Pfam Mitochondrial carrier protein 10 108 IPR018108 -
Vimu9g01084 305 Pfam Mitochondrial carrier protein 216 299 IPR018108 -
Vimu9g01084 305 Gene3D Mitochondrial carrier domain 6 304 IPR023395 -
Vimu9g01084 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 115 206 IPR018108 -
Vimu9g01084 305 FunFam Mitochondrial uncoupling protein 1 14 303 - -
Vimu9g01084 305 SUPERFAMILY Mitochondrial carrier 10 294 IPR023395 -
Vimu9g01084 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 215 298 IPR018108 -
Vimu9g01084 305 PANTHER MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED 14 296 - -
Vimu9g01084 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 11 105 IPR018108 -
Vimu9g01084 305 PRINTS Mitochondrial brown fat uncoupling protein signature 169 186 IPR002030 GO:0006839|GO:0031966
Vimu9g01084 305 PRINTS Mitochondrial brown fat uncoupling protein signature 46 65 IPR002030 GO:0006839|GO:0031966
Vimu9g01084 305 PRINTS Mitochondrial brown fat uncoupling protein signature 212 230 IPR002030 GO:0006839|GO:0031966
Vimu9g01084 305 PRINTS Mitochondrial brown fat uncoupling protein signature 18 30 IPR002030 GO:0006839|GO:0031966
Vimu9g01084 305 PRINTS Mitochondrial brown fat uncoupling protein signature 287 305 IPR002030 GO:0006839|GO:0031966
Vimu9g01084 305 PRINTS Mitochondrial brown fat uncoupling protein signature 99 111 IPR002030 GO:0006839|GO:0031966
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01084 Vimu-Chr9 18107792 18111604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01084 8 305 Miscellaneous Gene Families AT3G54110 83.946 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01084 K15103 - gmx:100809667 581.252