Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00966 ATGGCCAGCATCAAGTGTGCGTGCATCGTTGCCCTCCTGTGCTTGGTGGTTGCCACCGCACCCACGGCACATGCCATCACCTGCGGCCAGGTCACAGGTTCCCTCACTCCATGCATCCCATTCATCACCAAGGGTGGGAAAGTGCCGCCGGCATGCTGCGCCGGAGTGAGGTCCCTCAACGCCGCCGCAAAGACCACCCCGGACCGCCAGGCCGTGTGCAACTGCCTCAAAAGCGCCGCCGGCAGCATCGGTGGGTTCAATGCTAACAACGCAGCCATAATCCCGGGCAAGTGTGGCGTCAGCATCCCCTACAAGATCAGCACCACCACCAACTGCGCTACGTAA 345 0.6203 MASIKCACIVALLCLVVATAPTAHAITCGQVTGSLTPCIPFITKGGKVPPACCAGVRSLNAAAKTTPDRQAVCNCLKSAAGSIGGFNANNAAIIPGKCGVSIPYKISTTTNCAT 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00966 114 CDD nsLTP1 26 112 - -
Vimu9g00966 114 Gene3D - 25 114 IPR036312 -
Vimu9g00966 114 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 26 113 IPR036312 -
Vimu9g00966 114 Pfam Protease inhibitor/seed storage/LTP family 28 112 IPR016140 -
Vimu9g00966 114 FunFam Non-specific lipid-transfer protein 25 114 - -
Vimu9g00966 114 SMART aai_6 28 112 IPR016140 -
Vimu9g00966 114 PRINTS Plant phospholipid transfer protein signature 103 114 IPR000528 GO:0006869|GO:0008289
Vimu9g00966 114 PRINTS Plant phospholipid transfer protein signature 47 61 IPR000528 GO:0006869|GO:0008289
Vimu9g00966 114 PRINTS Plant phospholipid transfer protein signature 68 83 IPR000528 GO:0006869|GO:0008289
Vimu9g00966 114 PRINTS Plant phospholipid transfer protein signature 85 102 IPR000528 GO:0006869|GO:0008289
Vimu9g00966 114 PRINTS Plant phospholipid transfer protein signature 27 43 IPR000528 GO:0006869|GO:0008289
Vimu9g00966 114 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 2-RELATED 6 113 IPR000528 GO:0006869|GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00966 Vimu-Chr9 16203585 16205172 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00966 8 112 Acyl Lipid Metabolism Gene Families AT5G59320 57.143 1.38e-36 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00966 - - gmx:100306510 164.466