Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00963 ATGGCAGCTGGCAATGGATCTGTGGAAACCCTCAAAATGGTGGAATACTTTAATGGAAGGGCAAATATATCAGGGAACTTTCCTCTTGGGAGTTTTAATGCTGCATTTAGCTTCACCGGTTCAAAACATATTGATGCTGCAGCCACAAAGACCTTGTCTACAGAAGGATTTTACATTCCTCTTGCAAAGGTTCAGCTTAAAAAGTCCCACTTAACTTTGCAAGGAAATGTCAAAAGGGCTGTCCCATTCAATTGGGACCCACCGGCCTTGGCAAGTTTTATCGAAAATTTTGGGACTCATGTCATTACATCTATAACTATTGGTGGTAAAGATGTTATTTATGTTAAACAACACCATACTTCTTCTTTGTCAAAGTTGGAGATGAAAAACTATATTCAGGATATTGGAAATCAGAGGTTCTCTGACATCAATAGTCAAACAAGTGCAGGTCAAACAAAATCGAAGGATAAGGGTGTTGATTCGTTTTCATTCAATAGTCAAGGAGTTTACCCCCAACCCACAACTGCAACATATCCTTCTGGGAAAGAAGATGTCACAGTCATTTTTAGAAGAAGAGGAGGAGATGATTTAGAACAGAACCACATGAAATGGCTATCAACTGTCAAGTCCTCCCCAGATATCATTGAGATGACTTTCTGTCCTATAACTGCTCTACTTGATGAAATACCTGCCAAGGAGCATTTGACTCGTGCCATTGTTAAACCTCCAATTGAAGAACTTAGATATTTCCTGGAGTTTCAGATTCCTCGTGTATGGGCTCCTTTACAAGACAGGATTCCTGGTCAACAAAGGAAGGAACCCGTGTGTCCATCTTTGCAATTCAGCATAATGGGCCAGAAACTTTACATCAGTCAAGAACAGATTACAGTGGGACGAAGGCCGGTAACAGGACTACGTCTCTGTCTAGAAGGAAGCAAGCAGAATCGGCTGAGCATTCTTGTTCAGCACTTGGTATCCCTTCCAAAAATCCTTCATCCGTATTGGGACAGCCATGTTGCTATAGGTGCTCCCAAGTGGCAGGGACCCGAGGAGCAAGACAGCAGATGGTTTGAACCAGTTAAATGGAAGAACTTTTCTCATGTGAGCACTGCACCAATTGAGAATCCTGAAACCTTCATAGGAGACTTTTCTGGTGTCCACATAGTTACTGGAGCACAGCTTGGAGTGTGGGATTTTGGATCACGGAATGTGCTGTACATGAAGCTCTTATATTCAAGGTTACCCGGCTGCACCATTCGAAGATCGCTGTGGGACCATGCCGGAAACAGTTCGTCAAAAACAGTGAATGTTGGAAACACCTCCAACTCAGATAACTCAACCCTGGGAGAAAATGCCACAGGGAACAAGTTGGTGAAGTATGTTGACATGTCTGCGATGATCAAAGAGCCCCAAGACCCTCCTGGCCATTGGCTTGTCACTGGTGGAAAGCTTGGTGTAGAAAAAGGGAAAATTGTTTTGAGATTTGTGTTTGAGGACGTGCTTGCAGTGGTGGCCTGTGTAAGAAGCAGTGCTTGTGCTTTGGATGAGTTAGAGAATATGGGTAATAATTTTGATCGTGAAAATTTATGTAATCAGGGAGATATGAATATCAATTTGAATCCTTTGAGTGAAGGTTCTGGATTCAATGTGCATAATTCTCTAGATGCTAATTCGGACTCGGATGTTCTGAATGATAAGCTTTATTTCTTGGCTGGTGTTTATGGACCTAAAAGCTGCTTGGGAAGGAGGGATCTTTGGAAAGATCTTTGTGATATCCAAGCAGCTAATTCTGGAAACTGGTTTATCATGGGACACTTCCATCTTCATAAGGGTGGTAATACTCCTAATTCTACTCCATACTTTGTTTCTTCTGATTTTGATTACACTTTGACTAATGGTGATATTAGTCCACAAAGGATTGACATTAACTCGACAGAACTTTTTGTAGCTTATCATGCCTTAATAAATGGAGTAATGTCTCTTGAGGACTCTTCAAGATTTTTTACCATGTGGGTTGACAAAGACGATTGTGAGCATATTATTAGAATTAAATGGAATAAACCTGTTGTTGGAGAGGAAGAGACAACAATGAAGGATAACAACAAGATCACGCGAAGAATGAAACCTATGGTGGTGGAGGCTCCTCCAAGCATGAATCGCGAAAGAAAAAGCTCCAATATCAGAAGCACATATAAATTAAAATCAGTGCATGGAAGAGAGGTGTGTACACGAAGCCTCACAACTCAGAAAGTCTTCCTACTAAGGAAGGAAGCTAGAGGAAGGCCAAATATTGTTGAACATGAACCAGGTGCTCACATGGACAACCACTCCTTCACATGGAAAATGTCACTCGTGCAACTGGACTTGACAAGGTTTCGGCTAGGTGGCCCTCTGTTTCGAAAGTTGTTTTCCTTCAAAAATTCAATCGGTAAAACAAGATTCTCGATTCGGAAGGTAACCAAAATTTTGAGCTCTCTTTGCTCTTTTGCTTCCTTTGATCTAAGAAGTTTTTCGCTGGTTGGTGTTATCAATGAGGAACATTGA 2544 0.4147 MAAGNGSVETLKMVEYFNGRANISGNFPLGSFNAAFSFTGSKHIDAAATKTLSTEGFYIPLAKVQLKKSHLTLQGNVKRAVPFNWDPPALASFIENFGTHVITSITIGGKDVIYVKQHHTSSLSKLEMKNYIQDIGNQRFSDINSQTSAGQTKSKDKGVDSFSFNSQGVYPQPTTATYPSGKEDVTVIFRRRGGDDLEQNHMKWLSTVKSSPDIIEMTFCPITALLDEIPAKEHLTRAIVKPPIEELRYFLEFQIPRVWAPLQDRIPGQQRKEPVCPSLQFSIMGQKLYISQEQITVGRRPVTGLRLCLEGSKQNRLSILVQHLVSLPKILHPYWDSHVAIGAPKWQGPEEQDSRWFEPVKWKNFSHVSTAPIENPETFIGDFSGVHIVTGAQLGVWDFGSRNVLYMKLLYSRLPGCTIRRSLWDHAGNSSSKTVNVGNTSNSDNSTLGENATGNKLVKYVDMSAMIKEPQDPPGHWLVTGGKLGVEKGKIVLRFVFEDVLAVVACVRSSACALDELENMGNNFDRENLCNQGDMNINLNPLSEGSGFNVHNSLDANSDSDVLNDKLYFLAGVYGPKSCLGRRDLWKDLCDIQAANSGNWFIMGHFHLHKGGNTPNSTPYFVSSDFDYTLTNGDISPQRIDINSTELFVAYHALINGVMSLEDSSRFFTMWVDKDDCEHIIRIKWNKPVVGEEETTMKDNNKITRRMKPMVVEAPPSMNRERKSSNIRSTYKLKSVHGREVCTRSLTTQKVFLLRKEARGRPNIVEHEPGAHMDNHSFTWKMSLVQLDLTRFRLGGPLFRKLFSFKNSIGKTRFSIRKVTKILSSLCSFASFDLRSFSLVGVINEEH 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00963 847 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 1 251 IPR020864 -
Vimu9g00963 847 Pfam MAC/Perforin domain 30 239 IPR020864 -
Vimu9g00963 847 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 12 495 IPR044663 GO:0006952|GO:0012501|GO:2000031
Vimu9g00963 847 SMART MACPF_8 49 241 IPR020864 -
Vimu9g00963 847 MobiDBLite consensus disorder prediction 431 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00963 Vimu-Chr9 16160848 16170148 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00963 - - gmx:100817248 892.878