Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00944 ATGGAGGGAAGAATGGGGCTTTTGTTTCTGTTTTTGTTGGGTGCTGCTTGGGTTTGTGATGCAAGAGAGCTAGCAAACGGTGGTGAAGTAAACAGGAAATCAGATGTCTGTGAACTTTGTGAGGAATATACCACAGAGGCACTTGATTATCTAAATGATAAAGAGAACCAAAGAGAGATTATTGATTCACTTCACAATAAATGTTATCAGATTCTCTCTTTCAAACAGCAGTGCATTGAATTGGTGGATTATTATGCCCCACGTTTCTTCTCAGAAATCGCATCAGTTCTGCCTAGAGAACTCTGCAGACAGGTCCACCTCTGCCAATCTGCAAATATTTCCTCACAAGTTCAAGGAAATAAGTGTGACTCTTGCAAAGATACTGTTTCAGCCATACTGGTTAAGTTGAATGATCCTGACACCAAGCTTGAGATAATGGAGGCACTGTTGAAGGCATGCAATTCTATGGATCAGTTGGCGAAGAAGTGCAAGAGGATGGTTTTTGAATATGGACCTCTGATTATTGTGAAAGCAGAGAAGTACCTGAAAACAACAGATATATGCACTACATTACATGTTTGCCCAGCTTATACTGCCGTTAGCAACAAGGAAGCCTCAATCATGGAAGAAGAACCTTTGATTTCTGACTCCTAA 654 0.4067 MEGRMGLLFLFLLGAAWVCDARELANGGEVNRKSDVCELCEEYTTEALDYLNDKENQREIIDSLHNKCYQILSFKQQCIELVDYYAPRFFSEIASVLPRELCRQVHLCQSANISSQVQGNKCDSCKDTVSAILVKLNDPDTKLEIMEALLKACNSMDQLAKKCKRMVFEYGPLIIVKAEKYLKTTDICTTLHVCPAYTAVSNKEASIMEEEPLISDS 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00944 217 ProSiteProfiles Saposin B type domain profile. 118 198 IPR008139 -
Vimu9g00944 217 PANTHER SAPOSIN-RELATED 21 204 - -
Vimu9g00944 217 Pfam Saposin-like type B, region 1 121 156 IPR007856 GO:0006629
Vimu9g00944 217 Pfam Saposin-like type B, region 1 35 70 IPR007856 GO:0006629
Vimu9g00944 217 Gene3D - 117 197 - -
Vimu9g00944 217 Gene3D - 32 109 - -
Vimu9g00944 217 FunFam Pulmonary surfactant-associated protein B 118 196 - -
Vimu9g00944 217 Pfam Saposin-like type B, region 2 161 194 IPR008138 -
Vimu9g00944 217 Pfam Saposin-like type B, region 2 76 108 IPR008138 -
Vimu9g00944 217 SUPERFAMILY Saposin 34 110 IPR011001 -
Vimu9g00944 217 ProSiteProfiles Saposin B type domain profile. 33 112 IPR008139 -
Vimu9g00944 217 SMART sapb_4 35 108 IPR008139 -
Vimu9g00944 217 SMART sapb_4 120 194 IPR008139 -
Vimu9g00944 217 SUPERFAMILY Saposin 120 196 IPR011001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00944 Vimu-Chr9 15727849 15732675 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00944 K12382 - gmx:100527899 357.836