Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00940 ATGTGGAGGCACATCAATGGAAGAATATCCAGAAGATTTTTATCCACTTCTTGTTGTTCCAGTGCCCGTGGTTGGTGGGACCATGTAAGACCAGCCCCAAAGGACCCTATTGTCACTGTCAACGAGGCTTTTCAATCAGACCCTTTTCCCCACAAGATCAATCTTGGAATGGGAACTTACAGGGGTGATGATGGCAAACCTTTCATTCCTCAATCTGTCCGCGATGCAGAAATAAAGATTCAGAGATGCAAATCGGAGGAGTCAAACTGTTCCGCAGTCAGAACAAAATTTGTCGAGGAGTGTGTAAAATTGGCATATGGGAATGATTCATATGTTGTAAAAGAAGGATTGTTTGCAGGAGTTCCAACTCTGTCTGGAACTGCAGCATGTAGGCTTTTTGCTGAATTTCAAAGACATTTTTGTCCTGAATCTCAAATGTATCTACCAGACCCTACCTGGTCAAATCACCACAATATATGGAGACAAGCTGAAATTCCTGTCAAAACTTTTCACTACTACCATCCAGACACAAAGGGTTTAAATTTTTCTGCACTTCTCAGTGATGTCAAGAATGCACCAGATTGTTCTTTCTTCTTGCTTCATCCTTGTGCCCACAATCCAACTGGTGTTGACCCTACCGAGGAACAATGGAGAGAAATATCATACCAGTTTAAGGTAAAAAATCATTTCCCCTTCTTTGACATGGCTTATCAAGGATTTTCTAGTGGGGATCTTGACAAGGATGCTGTAGCACCTCGAATTTTCCTTGAAGATGGGCATTTAATAGGATGTTCTCAATCATTTTCAAAGAACATGGGATTATCCGAACATAAAGTTGGTTGTCTTAGTGTTTTGTGCCAGAGTACAAAGCAAGTAGCTGCACTTAAAAGTCAACTGCAGTTGATGTCCCATGCAATGTATAGCAGCATTCCTTTTCATGGTATTTCACTAGTTGCTAAGATATTAAGCGACCCTGATGTAGAAGCACTTTGGAGGGAAGAAATAAAGGTCATGGCTAATCGGATTGAAACAATGCGAACTACCCTTCGACAATATCTTGAGAAATTGGAATCATCTTTCAACTGGGAGCATATAACTTCTCAGGTTGGCATGTTCTGTTTTTCTGGATTAACCCCTGATCAGGTTAAACAGCTGGAGAAACTGTTCCATATATACATGACTCCTGATGGAAGAATAAGTATGGCAGGTGTGACCACGAGCAATGTGGCTTATTTGGCAAATGCAATACACCAGGTGACCAGAATCCATGAAGAAGCACTAAGCTCATCTTACGTTTAG 1299 0.4119 MWRHINGRISRRFLSTSCCSSARGWWDHVRPAPKDPIVTVNEAFQSDPFPHKINLGMGTYRGDDGKPFIPQSVRDAEIKIQRCKSEESNCSAVRTKFVEECVKLAYGNDSYVVKEGLFAGVPTLSGTAACRLFAEFQRHFCPESQMYLPDPTWSNHHNIWRQAEIPVKTFHYYHPDTKGLNFSALLSDVKNAPDCSFFLLHPCAHNPTGVDPTEEQWREISYQFKVKNHFPFFDMAYQGFSSGDLDKDAVAPRIFLEDGHLIGCSQSFSKNMGLSEHKVGCLSVLCQSTKQVAALKSQLQLMSHAMYSSIPFHGISLVAKILSDPDVEALWREEIKVMANRIETMRTTLRQYLEKLESSFNWEHITSQVGMFCFSGLTPDQVKQLEKLFHIYMTPDGRISMAGVTTSNVAYLANAIHQVTRIHEEALSSSYV 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00940 432 CDD AAT_like 121 418 - -
Vimu9g00940 432 SUPERFAMILY PLP-dependent transferases 25 421 IPR015424 -
Vimu9g00940 432 PRINTS Aspartate aminotransferase signature 297 322 IPR000796 GO:0006520|GO:0008483
Vimu9g00940 432 PRINTS Aspartate aminotransferase signature 229 241 IPR000796 GO:0006520|GO:0008483
Vimu9g00940 432 PRINTS Aspartate aminotransferase signature 365 383 IPR000796 GO:0006520|GO:0008483
Vimu9g00940 432 PRINTS Aspartate aminotransferase signature 198 217 IPR000796 GO:0006520|GO:0008483
Vimu9g00940 432 Pfam Aminotransferase class I and II 51 416 IPR004839 GO:0009058|GO:0030170
Vimu9g00940 432 FunFam Aspartate aminotransferase 315 416 - -
Vimu9g00940 432 Gene3D - 83 324 IPR015421 GO:0003824
Vimu9g00940 432 Gene3D Aspartate Aminotransferase, domain 1 29 416 IPR015422 GO:0003824
Vimu9g00940 432 PANTHER ASPARTATE AMINOTRANSFERASE 22 420 IPR000796 GO:0006520|GO:0008483
Vimu9g00940 432 FunFam Aspartate aminotransferase 83 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00940 Vimu-Chr9 15625755 15629030 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00940 K14455 - gmx:100814593 786.949