Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00913 TTGGGTTTCTCTCCGGATCCCATAGCCAGAAAATTATCCTCCGCTAGAGCCAAAATCATGTTTCCTCTTTTGACGAGGCTTTTGACGCGACGATCGCAGCCGCTTCACTGGCGACGCAGCTTTGCTCGGGCGGCGGTGGACGCCGAGAAGGCACCTGCCATCAGAGAACTTCCGCCGTTTGATTACTCCCCGCTGCCGTATGCAGGGCCCGCCGCCGAAGAGATTCTGGCGAAGCGCAGAGAGTATCTGAGTCCTTCCATTCTGCATATGTACAAGAATCCCGTGAACATAGTGGAAGGAAAGAAACAGTACCTGTTCGATGAAAATGGGAGAAGATACGTGGACGCGTTTGGAGGGATTGCTACGGTGTGTTGCGGCCACTGTCACCCTGATGTGGTGGAGGCCATAGTGAACCAAACCACAAAGTTGCAGCACTCCACCGTTCTATACCTTAACCACGCCATCGCCGATTTCGCTCAGGCTTTGGCTTCTAAGCTTCCCGGTGACCTAAAGGTAGTGTTTTTCACAAACTCGGGAACCGAAGCAAACGAATTGGCCATTCTGATAGCAAGGATGTACACTGGGTGTCATGACATAATATCTCTGAGAAATGCTTATCACGGTAATGCAGCTGGAACAATGGGAGCCACAGCTCAAAGTATCTGGAAATTCAATGTTGTGCAGAGTGGTATTCATCATGCAGTAAATCCAGACCCTTACAGAGGAATTTTCGGTTCTGATGGAGAAAAATATGCAAGAGATGTTCAAGATATCATTAACTTTGGAACTTCTGGACATGTTGCAGCCTTCATGTCTGAAGCTATCCAGGGAGTGGGGGGTATCGTTGAACTGGCTCCTGGTTACTTGCCTGCTGTATACAATACCATAAAAAAAGCAGGAGGACTTTTCATTGCAGATGAGGTTCAGGCGGGCTTTGGTCGCACTGGTAGCCATTTTTGGGGATTTGAGTCCCACAACGTTGTTCCTGACATAGTGACAATGGCTAAGGGCATTGGAAATGGTTTTCCCCTTGGTGCTGTTGTAACAACTCCAGAGATTGCAGAGGTCTTAACCCACCGGAATTACTTTAACACCTTTGGTGGGAATCCTGTTAGTACTGCTGCAGGGTTGGCTGTTTTAAAAGTAATAGAGAAAGAACAGCTTCAGAAAAATGCACTTGAGGTTGGAACCTATTTGAAAGAAAGGCTCACTAGCCTAAAGGACAAATATGAATTGATTGGTGATGTGAGAGGAAGAGGCCTGATTCTAGGAGTTGAACTTGTCACTGATCGTGAGCTTAAAATTCCAGCAAAAGCAGAAACATTGCATGTAATGGACCAAATGAAAGAATTAGGGGTACTTATTGGCAAGGGTGGTTACTATGGAAATGTCTTCAGAATTACACCCCCCTTGTGTTTCACCAAAGAAGACGCAGATTTCGTAGTAGATGCAATGGACTTGACCTTGTCTAGAATGTGA 1479 0.4665 MGFSPDPIARKLSSARAKIMFPLLTRLLTRRSQPLHWRRSFARAAVDAEKAPAIRELPPFDYSPLPYAGPAAEEILAKRREYLSPSILHMYKNPVNIVEGKKQYLFDENGRRYVDAFGGIATVCCGHCHPDVVEAIVNQTTKLQHSTVLYLNHAIADFAQALASKLPGDLKVVFFTNSGTEANELAILIARMYTGCHDIISLRNAYHGNAAGTMGATAQSIWKFNVVQSGIHHAVNPDPYRGIFGSDGEKYARDVQDIINFGTSGHVAAFMSEAIQGVGGIVELAPGYLPAVYNTIKKAGGLFIADEVQAGFGRTGSHFWGFESHNVVPDIVTMAKGIGNGFPLGAVVTTPEIAEVLTHRNYFNTFGGNPVSTAAGLAVLKVIEKEQLQKNALEVGTYLKERLTSLKDKYELIGDVRGRGLILGVELVTDRELKIPAKAETLHVMDQMKELGVLIGKGGYYGNVFRITPPLCFTKEDADFVVDAMDLTLSRM 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00913 492 Gene3D - 129 386 IPR015421 GO:0003824
Vimu9g00913 492 FunFam Acetylornithine aminotransferase 129 387 - -
Vimu9g00913 492 Pfam Aminotransferase class-III 94 486 IPR005814 GO:0008483|GO:0030170
Vimu9g00913 492 Gene3D Aspartate Aminotransferase, domain 1 94 487 IPR015422 GO:0003824
Vimu9g00913 492 ProSitePatterns Aminotransferases class-III pyridoxal-phosphate attachment site. 303 341 IPR005814 GO:0008483|GO:0030170
Vimu9g00913 492 PANTHER - 54 490 - -
Vimu9g00913 492 CDD OAT_like 94 486 IPR005814 GO:0008483|GO:0030170
Vimu9g00913 492 SUPERFAMILY PLP-dependent transferases 73 490 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00913 Vimu-Chr9 14796431 14802674 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00913 K00827 - gmx:100170733 862.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00913 9 14796431 14802674 Vimu9g00913 9 14796431 14802674 ECH