Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00908 ATGAGTCAAGCTACTATTCGAGGAAGCTTGCAAGAGGGTCTGCAAGATGCAGCATCAGTTGGAATTACAAATGATTTCGAGGTAAATGTAAACAGTGCTCTTCAAGTTTCATCTTCCCAAAGGAGACTTCTGAAGGATGAAAACCATCATATAATGAAACACAGAATGTTGATGTCTATTAGCAATATCTTTAAACTGAATAGACTCACACTCTGTGCTAATTTAGCTTCTCCATCTATGCAGAAGACTGAGGGAAGATTTGAATTCTCTCAGTTTTTGTCTTCATCCATCAAGGAAAAGCTGAGAAAACCTTTCAATTGTTGTTTTTCCAAGAAGATTTGTGGGCCATCTCTCGGGAGAAGCTGCACAAAATGGATTAAGAACCCTTTGAACATGGCCCTTCTTTTATGGACAGTTTGTGTTGCTGTTTCAGGAGCAATTCTGTTTCTCGTCATGACAGGAATGCTGAACAAAATCCTTACTAAGCAGTCACAAAGAAACTCATGGTTTGAGGTCAACAACCAATTTCTCAATGCACTATTTACTCTCATGTGTCTATACCAACATCCAAAGAGGCTCCACCATCTTGTACTTCTTTGTAGGTGGAAGCCAAATGACATCATAATCCTAAGAAAAACATACTGCAAGAATGGCACTTGCAAGCCTCGTGAATGGATGCATATGATGGTGATAGTTCTGTTACTTCATGTTAATTGCTTTGCTCAATATGCCCTTTCTGGCCTTAACTGGGGTTTCAATAGATCGGATAGGCCTATTGTTGGGGTTGGTATATGCATCTCCATTGCAATTGCTGCTCCTTCAGTTGCAGGAGTTTACTCAATTGCCAGCCCTCTTGGAAAAGAATATGAAACTGAAGAAGCACAGAACAATATTCCTGTTAGTAATACATTTACATCAAGAAATGAGCATAGTATTGCTGAGTACACACCTCAATGGAAAGGGGGACTATTTGATCTTTGGGACAATCTTTTTGTGGCATGTCTCACTCTCTTTTGTAGTTTTTGTGCCTTTGGAAGGAATATGCAGAGACTTCATTTTGGTAACATGTTTGTTCACGTTGCAACTTTTCTACTCCTGTGTGTAGCTCCCTTTTGGATATTCAACATGGCTACCATCAATATTGATGATGAGCCTGTGAGAATAGTTCTGCGGTTGATTGGTATATTTCTTTGTGTGTTTGGTTTACTCTACGGTGGCTATTGGAGGATTCAGATGAGGGAAAGATTTAACTTGCCACCAAATAAAATTTGTTGTGGGAATCCAGCAGTGACAGATTGCATACAGTGGCTATTGTGTTGCTGGTGTTCCCTTGCACAGGAAGTAAGAACTGCAGAATTCTATGACATAGTTGATGACAACTCTTTCTGCCAAAAACAGACTGAAAAGTCAGAAGATTATTCAAGTCTCTCAGAAATTGAGTTTTCAAGAGAAAGAAAGAAAAATGTTATGGAAGCGCCCATTGCCCTAACAATTCAAGTTGATGATAATGACATCAAAAGAACATAA 1527 0.391 MSQATIRGSLQEGLQDAASVGITNDFEVNVNSALQVSSSQRRLLKDENHHIMKHRMLMSISNIFKLNRLTLCANLASPSMQKTEGRFEFSQFLSSSIKEKLRKPFNCCFSKKICGPSLGRSCTKWIKNPLNMALLLWTVCVAVSGAILFLVMTGMLNKILTKQSQRNSWFEVNNQFLNALFTLMCLYQHPKRLHHLVLLCRWKPNDIIILRKTYCKNGTCKPREWMHMMVIVLLLHVNCFAQYALSGLNWGFNRSDRPIVGVGICISIAIAAPSVAGVYSIASPLGKEYETEEAQNNIPVSNTFTSRNEHSIAEYTPQWKGGLFDLWDNLFVACLTLFCSFCAFGRNMQRLHFGNMFVHVATFLLLCVAPFWIFNMATINIDDEPVRIVLRLIGIFLCVFGLLYGGYWRIQMRERFNLPPNKICCGNPAVTDCIQWLLCCWCSLAQEVRTAEFYDIVDDNSFCQKQTEKSEDYSSLSEIEFSRERKKNVMEAPIALTIQVDDNDIKRT 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00908 508 Pfam Protein of unknown function (DUF2985) 124 202 IPR021369 -
Vimu9g00908 508 Pfam PLAC8 family 319 449 IPR006461 -
Vimu9g00908 508 NCBIfam uncharacterized Cys-rich domain 318 452 IPR006461 -
Vimu9g00908 508 PANTHER PLAC8 FAMILY PROTEIN-RELATED 27 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00908 Vimu-Chr9 14512129 14515284 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00908 - - gmx:100799892 851.277