Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00900 ATGCCGCTCTCGAAGTACCGCGTGCGGAACGAGTACAGTTTAGCGGATCCCGAGCTGTATCGTGCGGCCGACAAGGATGATCCAGAAGCGCTTCTCGAAGCCGTCGCCATGGCTGGACTCGTTGGACTCTTGCGCCAGCTCGGCGACCTGGCCGAGTTTGCTGCTGAGATCTTCCATGATTTACATGAAGAAGTAATGGTTACCGCTGCAAGAGGCCACGGTCTCATGGCTCGTGTTAAACAGCTTGAGGCTGAAGTTCCTTCACTTGAGAAGGCTTTCTTTTCTCAAACTCATCACTCTTCATTCTATACCAATGGAGATTACATCAGCTGCTTCTTGAGGAGCGTATTGAAAATGGTTATAGTAATCCTGCACGACTAG 381 0.5066 MPLSKYRVRNEYSLADPELYRAADKDDPEALLEAVAMAGLVGLLRQLGDLAEFAAEIFHDLHEEVMVTAARGHGLMARVKQLEAEVPSLEKAFFSQTHHSSFYTNGDYISCFLRSVLKMVIVILHD 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00900 126 Gene3D - 1 90 - -
Vimu9g00900 126 PANTHER WASP-1 1 105 IPR028288 GO:0005856|GO:0030036
Vimu9g00900 126 FunFam SCAR family protein 1 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00900 Vimu-Chr9 14282294 14290846 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00900 - - var:108347390 211.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00083 6 984358 990536 Vimu9g00900 9 14282294 14290846 PCT