Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00892 ATGGAAGAAACCATCACATTGACAAGAGAACCTTTTCTTGCAAAAGAACAGCAAACTTCATCTTCTCTGATCAAGCATTTGTATATTGGTCACTTCTTAGCTAGATGGGATGCCAGGATGTGGGAATTCTCTGTTGGTTTATATATGGTCAACATATGGCCAGACTCTTTGTTGTATGCTGCAATATATGGTGCCATTGAGTCTGCCTCCATTGCACTGTTTGGCCCCATAATTGGAAAATGGGTTGATAAGTTGTCTTATGTGAAGGTTTTGCAGTTGTGGTTGGTGACACAAAATCTCTCTTTTGTTATTGCCGGAGCAACTGTAGTTGTTTTACTTGTCAACTCGGCTTTGAAGTTTACAAATTTTTCAGTTTTCACATTACTGTTATGGACCATCAATATCTGTGGTGGCATTGGTGTGCTTTCTACCCTTGCCGGCACAATCTTGATTGAAAGAGAATGGTTGTTAGTTATAGCGGAAGGTCAACCCCCAGAATTGCTGACAAAGATGAATTCAGTTATGAGACGCATTGATCTAACCTGCAAACTTCTTGCTCCAGTTATTACTGGGTTTATAATAAGCTTTGTTTCACTAAAAGCATCTGCTATAACTTTAGCACTGTGGAATACTGTGTCCGTTTGGGTGGAGTATTGGCTTTTCACATCTGTATATAATGGGATTCCAGCATTAGGCGAAAGTAGCCAGAGGAGGATGGCAAGACTATCACAAAGTGATCAACAAAGAAGCAATCCAACTGTGGAGGAAGATAGCTTGCTTTCTGTTACTGCTGGTAGCTCAGAATTGGTGGATAGAAAACACAGTAAAAAACTTCGTGAGAAGATTTCAGAAATTCCTTATGTTGCTGCATGGAAAGTTTATTTAAAGCAAGAAGTTGCCCTTCCTGGACTGGCTCTGGCTTTGCTATTTTTCACTGTACTCAGCTTTGGAACTTTGATGACAGCCACCTTAGAATGGGAAGGTATACCTGCATTTGTTATTGGAATGGCAAGAGGAATAAGTGCTGCGATTGGAATTGCAGCAACAGTTGCATATCCTATGCTACAGTCTCAAATATCAACTATTAGAGCAGGACTTTGGTCTGTATGGTCTCAGTGGACTTGCCTCATTCCATGTATAGCTGCAATATGGATCCATAGGGGCTTTCTATCATCATATATTCTTATGGGAAGTGTAGCCATTTCTCGCCTTGGATTGTGGATGTTTGATTTGTCTGATCTTGTTCCTGAATCTGATCGTTTGATTGTTGGGGGTGTCCAGAACTCACTTCAATCTTTGATGGACTTATTGGCCTATGTTATGGGAATCATAATTTCTGATCCACGGGACTTTTGGAAGTTGACATTTTTATCATTTCTAGCAGTCACATTAGCTGCACTCCTCTACTGCATCCATGTATACCATGTGCGGAAGCACCTCTTTCACTTTGATCGTCTAAAGTGGAATTAA 1470 0.4048 MEETITLTREPFLAKEQQTSSSLIKHLYIGHFLARWDARMWEFSVGLYMVNIWPDSLLYAAIYGAIESASIALFGPIIGKWVDKLSYVKVLQLWLVTQNLSFVIAGATVVVLLVNSALKFTNFSVFTLLLWTINICGGIGVLSTLAGTILIEREWLLVIAEGQPPELLTKMNSVMRRIDLTCKLLAPVITGFIISFVSLKASAITLALWNTVSVWVEYWLFTSVYNGIPALGESSQRRMARLSQSDQQRSNPTVEEDSLLSVTAGSSELVDRKHSKKLREKISEIPYVAAWKVYLKQEVALPGLALALLFFTVLSFGTLMTATLEWEGIPAFVIGMARGISAAIGIAATVAYPMLQSQISTIRAGLWSVWSQWTCLIPCIAAIWIHRGFLSSYILMGSVAISRLGLWMFDLSDLVPESDRLIVGGVQNSLQSLMDLLAYVMGIIISDPRDFWKLTFLSFLAVTLAALLYCIHVYHVRKHLFHFDRLKWN 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00892 489 SUPERFAMILY MFS general substrate transporter 26 479 IPR036259 -
Vimu9g00892 489 PANTHER SOLUTE CARRIER FAMILY 40 MEMBER 16 476 IPR009716 GO:0005381|GO:0016020|GO:0034755
Vimu9g00892 489 Pfam Ferroportin1 (FPN1) 25 462 IPR009716 GO:0005381|GO:0016020|GO:0034755
Vimu9g00892 489 CDD MFS_SLC40A1_like 27 472 IPR009716 GO:0005381|GO:0016020|GO:0034755
Vimu9g00892 489 Gene3D MFS general substrate transporter like domains 21 474 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00892 Vimu-Chr9 14111798 14117040 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00892 26 486 Organic Solute Cotransporters AT2G38460 57.627 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00892 K14685 - gmx:100802561 822.387