Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00891 ATGGAAGAAAGCGTGAAACTGAGGGTGCCTCCACTCACTGGACAACAAGAACAGCCATTAGCTCTAATCAATTATCTGTACATTGGTCACTTCTTAGCAAGATGGGGTACCAGAATGTGGGAATTCTCTGTTGGTTTATACATGATCAATATTTGGCCAGAGTCCTTGCTGTATGCAGCAATATATGGTGCCGTTGAATCTGCCTCCATTGCTGTGTGTGGTCCCATAATTGGAAGATGGGTTGATAAGTTGTCTTCTCTTAAGGTTTTACAGTTGTGGTTGGTGACACAAAATCTCTCTTTTGTTATTGCTGGGGCCTCTGTAGTTGCCTTACTCATCCACTCATCTTTGAAGTTTACACATTTCTCCATTTTCATGCTGCTTGTGTTGCTAATCAATGTCTGTGGTGGCATTGGTGTGCTTTCAACCCTTGCTGGTACAATCCTGATTGAAAGAGAATGGTTGTTAGTTATATCTGAAGATCAGCCCCCAGAATTGCTTACAAAGATGAATTCAGTCACAAGACGAATTGATCTGTGTTGCAAACTTCTTGCTCCTGTCATAACAGGGTTCATAATAAGCTTTGTATCACTAAAAGCATCTGCTATAACTTTTGCACTGTGGAATGCTGTCTCTGTTTGGGTGGAGTATTGGCTTTTCACATCTGTATATGAAGGGATTCCAGCTTTGGGCCAAAGCAGCCAGAAAAGGATGGCAAGATTTTTGCAATGTGATCAAGAAATGAAGAATCTAACTTCGGAGGAAGATAGCTTGCTTCCTGTTACTGAATGTAGCTCAGAATTAGCACATAGAAAATGGAACAAAAAAGTTTCTGAGAAAATTTCAGAGAATCCTTATATTGCTGCATGGAGAGTTTACTTACAACAAGAAGTTGCACTTCCTGGACTAGCTCTGGCTTTGCTATTTTTCACTGTACTAAGAGTCATTGATGGAATTCCAATTATTTGCCTCAGTTTTGGAACTTTGATGACAGCTACCTTAGAATGGGAAGGAATACCTGCATATGTTATTGGACTAGGAAGAGGAATAAATGCTGTGATTGGAATAGCTGCAACAGTGGTATACCCTGTGCTACAGTCTCGTATATCAACCATTAGAACTGGACTTTGGTCTATATGGTCTCAGTGGACTTGCCTCCTTCCATGTATAGCTGCAATATGGATCCAAAGTGGCTTTCTATCATCATATATTCTGATGGGAAGTGTAGCCACTTCTCGGCTTGGATTGTGGATGTTTGATTTGTCAGATCTTGTTTCTGAATCCGATCGTTTGATAGTTGGAGGTGTTCAAAGTTCACTTCAGTCTTTGATGGAATTGTTGGCCTATGTTATGGGAATCATAATATCTGATCCACGGGACTTCTGGAAATTGGCTGTAATATCTTTTCAAGCAGTCACATTAGCTGCTTTCCTCTACTGTATCCATTCATACCATGTAAGAAAGCACCTCTTCCACTTTGACAGAATGTTGTGGGCTAAATGTTTTCTAAGAGCATCTTAA 1521 0.4037 MEESVKLRVPPLTGQQEQPLALINYLYIGHFLARWGTRMWEFSVGLYMINIWPESLLYAAIYGAVESASIAVCGPIIGRWVDKLSSLKVLQLWLVTQNLSFVIAGASVVALLIHSSLKFTHFSIFMLLVLLINVCGGIGVLSTLAGTILIEREWLLVISEDQPPELLTKMNSVTRRIDLCCKLLAPVITGFIISFVSLKASAITFALWNAVSVWVEYWLFTSVYEGIPALGQSSQKRMARFLQCDQEMKNLTSEEDSLLPVTECSSELAHRKWNKKVSEKISENPYIAAWRVYLQQEVALPGLALALLFFTVLRVIDGIPIICLSFGTLMTATLEWEGIPAYVIGLGRGINAVIGIAATVVYPVLQSRISTIRTGLWSIWSQWTCLLPCIAAIWIQSGFLSSYILMGSVATSRLGLWMFDLSDLVSESDRLIVGGVQSSLQSLMELLAYVMGIIISDPRDFWKLAVISFQAVTLAAFLYCIHSYHVRKHLFHFDRMLWAKCFLRAS 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00891 506 CDD MFS_SLC40A1_like 25 482 IPR009716 GO:0005381|GO:0016020|GO:0034755
Vimu9g00891 506 Gene3D MFS general substrate transporter like domains 22 483 IPR036259 -
Vimu9g00891 506 PANTHER SOLUTE CARRIER FAMILY 40 MEMBER 21 486 IPR009716 GO:0005381|GO:0016020|GO:0034755
Vimu9g00891 506 SUPERFAMILY MFS general substrate transporter 26 488 IPR036259 -
Vimu9g00891 506 Pfam Ferroportin1 (FPN1) 23 472 IPR009716 GO:0005381|GO:0016020|GO:0034755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00891 Vimu-Chr9 14095934 14099895 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00891 16 504 Organic Solute Cotransporters AT2G38460 55.777 0.0 564
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00891 K14685 - gmx:100813172 829.32