Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00870 TCTTTTTCCCCACTTTCTCCACTTCTTTGTCTCCTTATAAGCCTTTCACCCTTCACCCCTTTTCCACTCCCAAACCCTTCTTTTCCATCCAAATTTGGCACCAAACACACCATGCCAAACCCTCTTTCTTTCCTCACATTCTCACTCCTTCTTCTCCTCTCTTGCCACCATCTCAACGCCCAAGAACACTCTGAGTTTGGCCATGCCGTAGACCGCAAGCTGTTAGGCCTAAAGAGGAAAGAAAAACTCAGTCATTTCAAGTTCTATTGGCATGACATTCTTAGTGGGCGCAACCCCACTTCAGTGTCGGTTGTTCCACCATCTTTGAAGCTCAACACCACCACAGCATTTGGCTTGGTCAACATGATCGACAACCCTTTGACTTTGGGGCCCGAATTGAGTTCCAAGCTTGTGGGGAAGGCTCAGGGGTTCTATGCCTCAGCTTCCCAGACCGAGATTGATCTTCTCATGGCCATGAACTTTGCATTCTCTGACGGGAAGTACAATGGCAGCACCATCACCATCTTGGGGAGGAACTGTGTTTTCAACAAGGTGAGGGAGATGCCTGTGATCGGAGGCAGTGGCCTTTTCAGGTTTGCAAGAGGCTATGCAGAGGCCAGGACCCATTGGGTTGATTTCAAGAGTGGGGATGCTATTGTTGAGTACAATGTTTATGTTATGCATTATTGA 690 0.4797 SFSPLSPLLCLLISLSPFTPFPLPNPSFPSKFGTKHTMPNPLSFLTFSLLLLLSCHHLNAQEHSEFGHAVDRKLLGLKRKEKLSHFKFYWHDILSGRNPTSVSVVPPSLKLNTTTAFGLVNMIDNPLTLGPELSSKLVGKAQGFYASASQTEIDLLMAMNFAFSDGKYNGSTITILGRNCVFNKVREMPVIGGSGLFRFARGYAEARTHWVDFKSGDAIVEYNVYVMHY 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00870 229 PANTHER NUCLEOPORIN-RELATED 69 225 IPR004265 -
Vimu9g00870 229 Pfam Dirigent-like protein 84 226 IPR004265 -
Vimu9g00870 229 Gene3D - 73 224 IPR044859 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00870 Vimu-Chr9 13581619 13583346 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00870 - - gmx:100808529 319.701