Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00663 ATGCAGTTCAGACTAGGCAAGCGCGTTTTCCGTGTCGCCACATGGCTCTTCCGTCGGGTTCGGTTCAGAACCCGACCCAACAGATATTGTCGTCTCGGATCCACCTCTCCTTCGCACAGTTACAATCATAATCCCATGACGAAGCTTCTTACATGGGGGACAAAGTTGAAGAGAGGAGCGCAGTCTCTCTGTAAGAAATCCGGGTCGGCTCTCGTTTGCGAGAGGGCTCCGGCGGTGCCGAAAGGGCACTTGGCAGTTTACGTGGCCGAGGACAACGGCGAGTGTCGCCGGGTTTTGGTGCCAGTGATTTACTTCAACCATCCTCTGTTCAGCGGGTTGTTAAGGGAAGCTGAGAAGGAATTCGGGTTCGAGCACCCCGGTGGGATCACGATTCCGTGCCGACTCACCGAATTTGAACGGGTCAAAACCCGGATAGCGTCCGGGTCGGGTTTACGTGGGAGAACCCGGAGGTTGGGGTGGCGGCTACATTCTTCTTGA 498 0.5582 MQFRLGKRVFRVATWLFRRVRFRTRPNRYCRLGSTSPSHSYNHNPMTKLLTWGTKLKRGAQSLCKKSGSALVCERAPAVPKGHLAVYVAEDNGECRRVLVPVIYFNHPLFSGLLREAEKEFGFEHPGGITIPCRLTEFERVKTRIASGSGLRGRTRRLGWRLHSS 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00663 165 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 64 140 IPR003676 GO:0009733
Vimu9g00663 165 Pfam Auxin responsive protein 66 142 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00663 Vimu-Chr9 8241975 8242472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00663 74 138 Calmodulin-binding Proteins AT3G43120 49.231 3.96e-16 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00663 K14488 - gmx:100808164 232.646
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00663 9 8241975 8242472 Vimu9g00663 9 8241975 8242472 ECH